A B C D E F G H I J L M N O P Q R S T U V W

A

activateObject(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerFactory

activateObject(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory

addCompletedAnalysis(String, AnalysisType) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

addGeneratedResource(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

addJobIds(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

addReportId(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

addReportId(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

addToDeleteTempFolder(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

addToDropTableList(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

alertJob(int, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

alterColumn(String, DBSession.ALTER_OPERATION, String...) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

ANALYSIS_MAX_WORKERS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

AnalysisManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalysisManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisManager

AnalysisMonitor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalysisMonitor() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisMonitor

AnalysisRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalysisResponseDescriptor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalysisResponseDescriptor(AnalysisType) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisResponseDescriptor

AnalysisTableManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

AnalysisTableManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

AnalysisUpdaterThread - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalysisUpdaterThread(long) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisUpdaterThread

AnalysisWorker - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalysisWorker(Analysis) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisWorker

Analyzer - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

Analyzer(int) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.Analyzer

ANALYZER_BATCH_POOL_SIZE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

AnalyzerFactory - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalyzerFactory() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerFactory

AnalyzerManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

AnalyzerManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerManager

analyzeTables(Analysis) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

append(AnalysisResponseDescriptor) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisResponseDescriptor

AQUAMAPS_OBJECT_MAX_WORKERS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

AQUAMAPS_WORLD_TABLE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

AquaMapsIsoMetadata - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

AquaMapsIsoMetadata() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

AquaMapsManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

AquaMapsManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

AquaMapsObjectData - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

AquaMapsObjectData(int, String, int, int, String, String, String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

AquaMapsObjectExecutionRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing

AquaMapsObjectExecutionRequest(Submitted, Set<Area>, BoundingBox) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

AquaMapsObjectWorker - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

AquaMapsObjectWorker(AquaMapsObjectExecutionRequest) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectWorker

AquaMapsService - Class in org.gcube.application.aquamaps.aquamapsservice.impl

AquaMapsService() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

B

BadRequestException - Exception in org.gcube.application.aquamaps.aquamapsservice.impl.publishing

BadRequestException(String) - Constructor for exception org.gcube.application.aquamaps.aquamapsservice.impl.publishing.BadRequestException

BatchGenerator - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

BatchGenerator(String, DBDescriptor) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

BatchGenerator(BatchGeneratorObjectFactory.BatchPoolType) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

BatchGeneratorI - Interface in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

BatchGeneratorObjectFactory - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

BatchGeneratorObjectFactory(BatchGeneratorObjectFactory.BatchPoolType) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory

BatchGeneratorObjectFactory.BatchPoolType - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

BiodiversityObjectExecutionRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

BiodiversityObjectExecutionRequest(Submitted, Set<Area>, BoundingBox, float, Set<Species>, Map<String, Map<String, Perturbation>>, Map<String, Map<EnvelopeFields, Field>>) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

BOOLEAN_DEFAULT_VALUE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

C

CachedObject<T> - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

CachedObject(T) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.CachedObject

calculateEnvelope(CalculateEnvelopeRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

calculateEnvelopefromCellSelection(CalculateEnvelopefromCellSelectionRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

calculateGoodCells(BoundingBox, List<Area>, String, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

CATALOG_OF_LIFE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

cell2Hcaf(Cell) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils.ModelTranslation

CellManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

CellManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

checkConstraints() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

checkExist(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

checkExist(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

checkExist(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

checkTableExist(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

checkTables() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

clazz - Variable in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

clean() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

cleanData(Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

cleanReferences(Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

cleanTemp(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

close() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

close() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.StatefullCSVLineProcessor

clusteringDistributionQuery(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

clusterize(ResultSet, int, int, int, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.FileSetUtils

Clusterize rs in N stringBuilders compliant with CsquareCode convention

commit() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

CommonServiceLogic - Class in org.gcube.application.aquamaps.aquamapsservice.impl

CommonServiceLogic() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.CommonServiceLogic

ConfigurationException - Exception in org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical

ConfigurationException() - Constructor for exception org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.ConfigurationException

ConfigurationException(String) - Constructor for exception org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.ConfigurationException

ConfigurationException(Throwable) - Constructor for exception org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.ConfigurationException

ConfigurationException(String, Throwable) - Constructor for exception org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.ConfigurationException

ConfigurationManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

ConfigurationManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

connection - Variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

continueProcessing() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.StatefullCSVLineProcessor

createIndex(String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

createLikeTable(String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

createLikeTable(String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

createLikeTable(String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

createTable(String, String[]) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

createTable(String, String[], int, String, DBSession.ENGINE...) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

createTable(String, String[]) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

createTable(String, String[]) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

CSV_DELIMITER - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

CUSTOM_QUERY_DELETION - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

CUSTOM_QUERY_KEEP_ALIVE_MINUTES - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

CustomQueryManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

CustomQueryManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

D

DataManagement - Class in org.gcube.application.aquamaps.aquamapsservice.impl

DataManagement() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

DataSourceDescriptor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

DataSourceDescriptor(String, String, String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

DBConfigurationManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db

DBConfigurationManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBConfigurationManager

DBDescriptor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

DBDescriptor(String, String, String, DBDescriptor.DBType, Integer) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

DBDescriptor.DBType - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

DBSession - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db

DBSession(Connection) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

DBSession() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

Deprecated.

DBSession.ALTER_OPERATION - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.db

DBSession.ENGINE - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.db

DBUtils - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db

DBUtils() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBUtils

delete(ArrayList<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

delete(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

delete(ArrayList<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

delete(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

delete(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

deleteAnalysis(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

deleteColumn(String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

deleteFile(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

deleteFromTables(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

deleteLayer(LayerInfo) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

deleteOperation(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

deleteOperation(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

deleteOperation(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

deleteSource(int, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

deleteSubmitted(StringArray) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

deleteWMSContext(WMSContextInfo) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

DeletionMonitor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads

DeletionMonitor(long) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.DeletionMonitor

delimiter - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

destroy(T) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

destroyObject(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerFactory

destroyObject(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory

disableAutoCommit() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

disableKeys(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

DistributionObjectExecutionRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

DistributionObjectExecutionRequest(Submitted, Set<Area>, BoundingBox, Set<Species>, Map<String, Perturbation>, Map<EnvelopeFields, Field>, AlgorithmType) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

DOUBLE_DEFAULT_VALUE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

dropTable(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

dropView(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

E

editHSPECGroupDetails(HspecGroupGenerationRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

editResource(Resource) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

ENABLE_SCRIPT_LOGGING - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

enableKeys(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

EnvironmentalLogicManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

EnvironmentalLogicManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.EnvironmentalLogicManager

EnvironmentalStatusUpdateThread - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables

EnvironmentalStatusUpdateThread(long) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.EnvironmentalStatusUpdateThread

equals(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

equals(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

equals(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

equals(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

executeFilteredQuery(List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

executeFilteredQuery(List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

executeFilteredQuery(List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

executeQuery(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

Deprecated.

executeUpdate(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

Deprecated.

ExportManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

exportTableAsCSV(ExportTableRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

exportTableToCSV(String, boolean, char) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

exportTableToCSV(String, boolean, char) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

exportTableToCSV(String, boolean, char) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

ExtendedExecutor - Interface in org.gcube.application.aquamaps.aquamapsservice.impl.util

F

FileSetUtils - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing

FileSetUtils() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.FileSetUtils

fileToString(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

fillParameters(List<Field>, int, PreparedStatement) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

fillParameters(List<Field>, int, PreparedStatement) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

fillParameters(List<Field>, int, PreparedStatement) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

findAvailableScopes(GCUBEScope) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Finds accessible scopes from current ghn context

FISHBASE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

formatTimeStamp(long) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

formDeletetQueryStringFromFields(List<Field>, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

formMap(CoverageDescriptor) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

formSelectCountString(List<Field>, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

formSelectDistinctQueryStringFromFields(List<Field>, Field, String, String, OrderDirection) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

formSelectQueryStringFromFields(List<Field>, String, String, OrderDirection) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

formUpdateQuery(List<Field>, List<Field>, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

G

generate() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

generateFileMap(String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.FileSetUtils

generateFileSet(AquaMapsObjectData, Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

generateHSPECGroup(HspecGroupGenerationRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

generateHSPECTable(String, String, String, AlgorithmType, Boolean, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

generateHSPECTable(String, String, String, AlgorithmType, Boolean, String) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorI

Deprecated.

generateId(String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

generateLayer(AquaMapsObjectData, Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

generateLayer(LayerGenerationRequest) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

generateMaps(GenerateMapsRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

generateMaps_Logic(int, List<Field>, String, boolean, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.CommonServiceLogic

generateTable(TableGenerationConfiguration) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

generateTable(TableGenerationConfiguration) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorI

GenerationRequest - Interface in org.gcube.application.aquamaps.aquamapsservice.impl.publishing

Generator<T> - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing

Generator(GenerationRequest, Class<T>) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

GEOSERVER_MAX_ATTEMPT - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

GEOSERVER_WAIT_FOR_DB_MS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

GEOSERVER_WAIT_FOR_FT - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

GEOSERVER_WAIT_FOR_RETRY_MINUTES - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

GeoServerDescriptor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

GeoServerDescriptor(String, String, String, String, String, String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

get(boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.RequestsMonitor

get() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

get(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesReader

getAbstractField() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getAdditionalParameters() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getAlgorithm() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

getAlgorithm() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getAlgorithm() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getAttributeName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getAuthor(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getAuthor() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getAvailableRequests() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisManager

getAvailableRequests(boolean, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

getAvailableRequests() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

getBackendUrl() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getBatch() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerManager

getBatch(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.EnvironmentalLogicManager

getBb() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

getBiodiversityStyle(int, int, StyleGenerationRequest.ClusterScaleType, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getById(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

getById(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

getById(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getC1() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getC2() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getCategorizedImages() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisResponseDescriptor

getCells(List<Field>, boolean, String, boolean, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

getCellsByIds(boolean, String, boolean, int, String[]) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

getChildren(GCUBEScope) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Queries IS for generic resources describing children of the given scope

getClusterScaleType() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getCommonTaxonomy(Set<Species>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getCompleteName(String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getConfiguration() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getConfigurationScope() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getConnection() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getContext() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

Returns cached instance

getCount(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getCount(List<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

getCount(List<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

getCount(List<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getCount(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

getCount(String, List<Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

getCsq_str() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getCsvFile() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getCsvFile() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getCSVList(List<Filter>, List<Filter>, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getCustomQueryDescriptor(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

getData(AquaMapsObjectExecutionRequest) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

getDatastore() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

getDate() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

getDBAquaMapsWorldTable() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getDBMaxConnection() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getDBTableSpaceCount() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getDBTableSpacePrefix() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getDefaultDistributionStyle() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getDefaultDistributionStyle() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

getDefaultId(ResourceType) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getDefaultSources(VOID) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

getDefaultStyle() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getDescriptor(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

getDetails() - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.util.ExtendedExecutor

getDetails() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.MyPooledExecutor

getDistinct(Field, List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getDistinct(Field, List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

getDistinct(Field, List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

getEcoligicalConfigDir() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getEntryPoint() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

getEnvelope(Species, Set<Cell>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGenerator

getEnvelope(Species, Set<Cell>) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGeneratorI

getEnvelopeCustomization() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

getEnvelopeCustomization() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

getEnvelopeWeights() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

getEnvelopeWeights() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

getExecutionEnvironment() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getExecutor(String, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.MyPooledExecutor

getExportStatus(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

getFeatureDefinition() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getFeatureLabel() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getField(int, SubmittedFields) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getFileSetById(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

getFilterCellByAreaQuery(HSPECFields, String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getFilterCellByAreaQuery(HSPECFields, String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

getFilterCellByAreaQuery(HSPECFields, String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

getFilteredHSPEN(String, Set<Species>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getFolderPath(ServiceContext.FOLDERS) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getGeneratedKeys(PreparedStatement) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getGenerationLiveReportGroup(StringArray) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

getGeoDb() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getGeoLayersAndStyles() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GroupGenerationRequest

getGeoNetwork() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

getGeoNetwork() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Query passed scope for RuntimeResources describing valid geoNetworks AtomicConditions : //Profile/Category = Constants.get().getGeoNetworkCategoryName() //Profile/Platform/Name = Constants.get().getGeoNetworkPlatformName() Valid Access Points : EntryName = Constants.get().getGeoNetworkEntryName()

getGeoNetwork() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getGeoNetworkCategoryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoNetworkEntryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoNetworkPlatformName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServer() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

getGeoServerAquaMapsDataStore() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerAquaMapsDefaultDistributionStyle() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerAquaMapsWorkspace() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerByEntryPoint(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getGeoServerCategoryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerDBAquaMapsDataStore() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerDBCategory() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerDBEntryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerDBPlatformName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerEntryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServerPlatformName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getGeoServers() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Query passed scope for RuntimeResources describing valid geoServers AtomicConditions : //Profile/Category = Constants.get().getGeoServerCategoryName() //Profile/Platform/Name = Constants.get().getGeoServerPlatformName() Valid Access Points : EntryName = Constants.get().getGeoServerEntryName() Mandatory properties : Constants.get().getGeoServerAquaMapsWorkspace() Constants.get().getGeoServerAquaMapsDataStore() Constants.get().getGeoServerAquaMapsDefaultDistributionStyle()

getGeoServers() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getGISDBDescriptor() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Query passed scope for RuntimeResources describing valid GIS Database AtomicConditions : //Profile/Category = Constants.get().getGeoServerDBCategory() //Profile/Platform/Name = Constants.get().getGeoServerDBPlatformName() Valid Access Points : EntryName = Constants.get().getGeoServerDBEntryName() Mandatory properties: Constants.get().getGeoServerDBAquaMapsDataStore() : boolean = true Constants.get().getDBMaxConnection() : integer DBDescriptor.AQUAMAPS_WORLD_TABLE

getGisId(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getHCAFTableId(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getHSPECTableId(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getHspecThreshold() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

getHSPENTableId(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getImage() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.ImageDescriptor

getInternalConnectionString() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PoolManager

getInternalDB() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Query passed scope for RuntimeResources describing valid Internal Database AtomicConditions : //Profile/Category = Constants.get().getInternalDBCategoryName() //Profile/Platform/Name = Constants.get().getInternalDBPlatformName() Valid Access Points : EntryName = Constants.get().getInternalDBEntryName() Mandatory properties: Constants.get().getInternalDBSchemaName() : boolean = true Constants.get().getDBMaxConnection() : integer DBDescriptor.TABLESPACE_PREFIX DBDescriptor.TABLESPACE_COUNT

getInternalDB() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getInternalDBCategoryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getInternalDBConnection() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PoolManager

getInternalDBEntryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getInternalDBPlatformName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getInternalDBSchemaName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getInternalDBSchemaValue() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getInternalDBSession() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getJNDIName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getJobId() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.WMSGenerationRequest

getJSONCells(PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

getJSONList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

getJSONList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

getJsonList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getJSONList(PagedRequestSettings, List<Filter>, List<Filter>, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getJsonList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getJSONOccurrenceCells(String, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

getJSONRequests(List<Field>, PagedRequestSettings) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

getJSONSubmittedByFilters(GetJSONSubmittedByFiltersRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

getJSONTaxonomy(Field, List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getLabels(ResourceType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

getLayerById(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

getLifetime() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.CachedObject

getList(ArrayList<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

getList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

getList(ArrayList<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

getList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

getList(List<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getList(List<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getList(List<Field>, Resource) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getList(List<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getList(List<Field>, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getLogic() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getMapName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getMapType() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getMax() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getMax() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getMaxConnection() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

getMaxMinHspenTable() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getMaxMinTable(Resource) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getMessages() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisResponseDescriptor

getMeta() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getMetadata() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getMetaForGIS(Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

getMin() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getMin() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.ImageDescriptor

getNameStyle() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getNClasses() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getObject(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

getObject() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

getObjects(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

getObjectsByCoverage(Integer, String, Boolean, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

getPagedResult(String, PagedRequestSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

getParam(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesReader

getPartitionsNumber() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getPassword() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

getPath() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getPhylogeny(GetPhylogenyRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

getPostGisDBConnection() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PoolManager

getPostGisDBSession() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForCount(List<Field>, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForDelete(List<Field>, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForDISTINCT(List<Field>, Field, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForInsert(List<Field>, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForInsertFromSelect(List<Field>, String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForInsertOnDuplicate(List<Field>, String, Integer[]) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForInsertOnDuplicate(List<Field>, String, Integer[]) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

getPreparedStatementForInsertOnDuplicate(List<Field>, String, Integer[]) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

getPreparedStatementForQuery(List<Field>, String, String, OrderDirection) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getPreparedStatementForUpdate(List<Field>, List<Field>, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getProbability(Species, Cell, Boolean, Boolean) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGenerator

getProbability(Species, Cell, Boolean, Boolean) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGeneratorI

return a list of fields representing an HSPEC row

getProperty(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getProperty(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

getPropertyAsBoolean(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getPropertyAsDouble(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getPropertyAsInteger(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getPropertyNames() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

getPublishedLayersId() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GroupGenerationRequest

getPublisher() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

getPublisherDB() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Query passed scope for RuntimeResources describing valid Publisher Database AtomicConditions : //Profile/Category = Constants.get().getPublisherDBCategoryName() //Profile/Platform/Name = Constants.get().getPublisherDBPlatformName() Valid Access Points : EntryName = Constants.get().getPublisherDBEntryName() Mandatory properties: Constants.get().getPublisherDBSchemaName() : boolean = true Constants.get().getDBMaxConnection() : integer

getPublisherDB() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getPublisherDBCategoryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getPublisherDBEntryName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getPublisherDBPlatformName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getPublisherDBSchemaName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getPublisherDBSchemaValue() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

getPurpose() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getReport(boolean) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.Analyzer

getReport(int, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerFactory

getReport(boolean) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

getReport(boolean) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorI

getReport(int, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory

getReport(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.HSQLDB

getReportId() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.Analyzer

getReportId() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

getReportId() - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorI

getRequests(Analysis, AnalysisWorker) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

getResourceInfo(Resource) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

getResults() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisResponseDescriptor

getScope() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

getSelectedArea() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

getSelectedSpecies() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

getSelectedSpecies() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

getServiceContext() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

getServiceContext() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

getServiceContext() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

getSourceGenerationTime() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getSourceName(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getSources() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getSourceTableName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getSourceTitle(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getSourceTitle() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getSpeciesByFilters(GetSpeciesByFiltersRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

return a list of species filtered by 3 groups of filters (species characteristics OR species names OR species codes)

getSpeciesByFiltersASCSV(GetSpeciesByFiltersRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

getSpeciesById(boolean, boolean, String, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getSpeciesByStatus(int, SpeciesStatus) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

getSpeciesCSVList() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getSpeciesEnvelop(GetSpeciesEnvelopeRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

getSpeciesNamesById(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

getStatus(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.ExportManager

getStatus(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getSubmissionBackend() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

getSubmittedById(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

getSubmittedId() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

getTableCount(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

getTables(ResourceType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

getTempFiles(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.FileSetUtils

getTempMapsFolder() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.FileSetUtils

getTextFromXPathExpression(String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ParserXPath

getTheObject() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.CachedObject

getThreshold() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

getTimestamp() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.CachedObject

getTimeStamp() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

getToAssociateStyles() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getToGenerateGroupName() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GroupGenerationRequest

getToGenerateStyles() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

getToPerformAnalysis() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

getToUseTableStore() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

getType() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisResponseDescriptor

getType() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

getType() - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorI

getType() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

getType() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

getTypeValue() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

getUser() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

getVODescriptor() - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

getWorkingHCAF(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

getWorkingHSPEC(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

getWorkingHSPEN(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

getWorkingTable(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

getWorkspace() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

GISRequest - Interface in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

GISUtils - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

GISUtils() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

GroupGenerationRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

GroupGenerationRequest(HashMap<String, String>, String, ArrayList<String>) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GroupGenerationRequest

H

hashCode() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

hashCode() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

hashCode() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

hashCode() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

hasHeader - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.GISUtils

HCAF_S - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CellManager

HSPEC_GROUP_MAX_WORKERS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

HSPECGroupMonitor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables

HSPECGroupMonitor() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupMonitor

HSPECGroupWorker - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables

HSPECGroupWorker(SourceGenerationRequest) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupWorker

Hspen2Fields(Hspen) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils.ModelTranslation

HSQLDB - Class in org.gcube.application.aquamaps.aquamapsservice.impl.monitor

HSQLDB() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.HSQLDB

HTTP_SERVER_BASE_PATH - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

HTTP_SERVER_BASE_PORT - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

I

ImageDescriptor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

ImageDescriptor(String, Image) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.ImageDescriptor

importFromCSVFile(ImportResourceRequestType) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

importResource(ImportResourceRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

init(boolean, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisManager

init(boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

init(boolean, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

init(GCUBEScope) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

Finds suitable scopes among available ones

insertAquaMapsObjectExecutionRequest(List<AquaMapsObjectExecutionRequest>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

insertInTable(Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

insertJobExecutionRequest(Job, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

insertNewJob(Job) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

Creates a new entry in Job table and AquaMap table (for every aquamap object in job)

insertOperation(String, List<List<Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

insertOperation(String, List<List<Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

insertOperation(String, List<List<Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

insertReportItem(String, long) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.HSQLDB

insertRequest(Analysis) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

insertRequest(SourceGenerationRequest) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

insertRequest(Analysis) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisManager

insertRequest(SourceGenerationRequest) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

insertRequests(List<AquaMapsObjectExecutionRequest>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

INTEGER_DEFAULT_VALUE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

IRMNG - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

isAquaMap(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

isAreaConstraints(BoundingBox, List<Area>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGenerator

isAreaConstraints(BoundingBox, List<Area>) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGeneratorI

ISCRAWLER_INTERVAL_MINUTES - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

isGIS(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

isJobComplete(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

ISQueryConstants - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

ISQueryConstants() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.ISQueryConstants

isSpeciesListReady(int, Set<String>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

isSpeciesSetCustomized(int, Set<String>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

isvalid() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.CachedObject

ITIS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

J

JOB_MAX_WORKERS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

JobExecutionManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

JobExecutionManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

JobManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

JobManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

JobWorker - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

JobWorker(Job, Submitted) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobWorker

L

LayerGenerationRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

LayerGenerationRequest(String, String, String, String, LayersType, List<StyleGenerationRequest>, List<String>, int, Map<String, Object>) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

leaveBatch(Analyzer) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerManager

leaveBatch(BatchGeneratorI) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.EnvironmentalLogicManager

loadAnalysis(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

loadObject(int, boolean, boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

loadSubmittedById(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

LOCAL_BATCH_POOL_SIZE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PoolManager

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.MapsGenerationRequestHandler

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.StatisticalModule

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ConfigurationManager

logger - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ParserXPath

M

makeObject() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerFactory

makeObject() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory

MapsGenerationRequestHandler - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical

MapsGenerationRequestHandler() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.MapsGenerationRequestHandler

markSaved(StringArray) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

markSaved(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

maxCLat - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils.ModelTranslation

maxSpeciesCountInACell - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_ALGORITHM - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_AUTHOR - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_DATE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_FILESET_URIS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_GEOMETRY_COUNT - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_KEYWORDS_MAP - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_OBJECT_TYPE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_SOURCE_TABLENAME - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_SOURCE_TIME - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_SOURCE_TITLE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

META_TITLE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AquaMapsManager

minCLat - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils.ModelTranslation

ModelTranslation - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils

ModelTranslation() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils.ModelTranslation

MONITOR_FREESPACE_THRESHOLD - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

MONITOR_INTERVAL - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

MyPooledExecutor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

MyPooledExecutor.MyThreadFactory - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

Uses java.util.concurrent.Executors.defaultThreadFactory() setting threadLabel and priority (optional)

MyPooledExecutor.MyThreadFactory(String, int) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.MyPooledExecutor.MyThreadFactory

MyPooledExecutor.MyThreadFactory(String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.MyPooledExecutor.MyThreadFactory

MySQLDBSession - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db

MySQLDBSession(Connection) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

N

newThread(Runnable) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.MyPooledExecutor.MyThreadFactory

notify(AnalysisResponseDescriptor, Analyzer) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

notifyError(Exception) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

notifyException(Exception, Execution) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupWorker

notifyGenerated(AnalysisResponseDescriptor, Analyzer) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisWorker

notifyGenerated(List<Resource>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupWorker

notifyGeneration(Execution) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

O

OBIS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

onFailure() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

onInitialisation() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

onReady() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

onShutdown() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext

org.gcube.application.aquamaps.aquamapsservice.impl - package org.gcube.application.aquamaps.aquamapsservice.impl

org.gcube.application.aquamaps.aquamapsservice.impl.db - package org.gcube.application.aquamaps.aquamapsservice.impl.db

org.gcube.application.aquamaps.aquamapsservice.impl.db.managers - package org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads - package org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads

org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis - package org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis

org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps - package org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions - package org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils - package org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils

org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical - package org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical

org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables - package org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables

org.gcube.application.aquamaps.aquamapsservice.impl.monitor - package org.gcube.application.aquamaps.aquamapsservice.impl.monitor

org.gcube.application.aquamaps.aquamapsservice.impl.publishing - package org.gcube.application.aquamaps.aquamapsservice.impl.publishing

org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis - package org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

org.gcube.application.aquamaps.aquamapsservice.impl.util - package org.gcube.application.aquamaps.aquamapsservice.impl.util

org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig - package org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

P

ParameterNotFoundException - Exception in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

ParameterNotFoundException() - Constructor for exception org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.ParameterNotFoundException

ParserXPath - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

ParserXPath() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.ParserXPath

passivateObject(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalyzerFactory

passivateObject(Object) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory

perturbationUpdate(String, Map<String, Perturbation>, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

PoolManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db

PoolManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.PoolManager

PostGresSQLDBSession - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db

PostGresSQLDBSession(Connection) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

preparedStatement(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

Deprecated.

processDataLine(int, List<String>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.StatefullCSVLineProcessor

processHeaderLine(int, List<String>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.StatefullCSVLineProcessor

produceImages(AnalysisRequest) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.Analyzer

PROGRESS_MONITOR_INTERVAL_SEC - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

PropertiesConstants - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

PropertiesConstants() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

PropertiesReader - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

PublisherService - Class in org.gcube.application.aquamaps.aquamapsservice.impl

PublisherService() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

PURGE_PENDING_HSPEC_REQUESTS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

PURGE_PENDING_OBJECTS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

Q

QueryConstructurThread - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads

QueryConstructurThread(String, QueryConstructurThread.Operation, String, String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.QueryConstructurThread

QueryConstructurThread.Operation - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads

quote(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBUtils

Produce a string in double quotes with backslash sequences in all the right places.

R

registerGeneratedSourcesCallback(List<String>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

registerSource(Resource) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

registerSources(List<String>, ResourceType, AlgorithmType, String, String, String, List<Resource>, String, ArrayList<Field>) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupWorker

release(BatchGeneratorI) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

release(BatchGeneratorI) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupWorker

REMOTE_BATCH_POOL_SIZE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.PropertiesConstants

remove(FileSet) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

remove(Layer) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

remove(WMSContext) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

removeHSPECGroup(RemoveHSPECGroupGenerationRequestResponseType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

removeReportId(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

removeReportId(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

removeResource(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

Report - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

Report() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.Report

ReportItem - Class in org.gcube.application.aquamaps.aquamapsservice.impl.monitor

ReportItem() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

request - Variable in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

RequestsMonitor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps

requestsTable - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

resubmitGeneration(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

retrieveMapsByCoverage(RetrieveMapsByCoverageRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.PublisherService

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.ExportManager

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.DeletionMonitor

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.QueryConstructurThread

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.SourceImporter

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisMonitor

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisUpdaterThread

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisWorker

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectWorker

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobWorker

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.RequestsMonitor

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.MapsGenerationRequestHandler

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.EnvironmentalStatusUpdateThread

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupMonitor

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.HSPECGroupWorker

run() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.StatusMonitorThread

S

selectedSpecies - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

selectedSpeciesIsCustomized - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

selectedSpeciesJobId - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

selectedSpeciesSpeciesID - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

selectedSpeciesStatus - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

ServiceContext - Class in org.gcube.application.aquamaps.aquamapsservice.impl

ServiceContext.FOLDERS - Enum in org.gcube.application.aquamaps.aquamapsservice.impl

ServiceUtils - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util

ServiceUtils() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

setActualValue(long) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setAlgorithm(AlgorithmType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

setAlgorithm(AlgorithmType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

setArchivePath(String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

setAttributeName(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setBb(BoundingBox) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

setC1(Color) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setC2(Color) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setClusterScaleType(StyleGenerationRequest.ClusterScaleType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setConfiguration(String, DBDescriptor) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.Analyzer

setConfiguration(String, DBDescriptor) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGenerator

setConfiguration(String, DBDescriptor) - Method in interface org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorI

setCountRow(int, Long) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

setCsq_str(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

setCsvFile(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

setCsvFile(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setCustomQuery(SetUserCustomQueryRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

setDefaultStyle(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setEnvelopeCustomization(Map<String, Map<String, Perturbation>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

setEnvelopeCustomization(Map<String, Perturbation>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

setEnvelopeWeights(Map<String, Map<EnvelopeFields, Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

setEnvelopeWeights(Map<EnvelopeFields, Field>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

setEvaluatedComputationCount(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

setFeatureDefinition(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setFeatureLabel(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setGisPublishedId(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

setMapName(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setMapType(LayersType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setMax(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

setMax(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setMin(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

setMin(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setNameStyle(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setNClasses(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setObject(Submitted) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

setOvercomesInLast10Hours(long) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setOvercomesInLast24Hours(long) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setOvercomesTotal(long) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setPath(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

setPhase(SourceGenerationPhase, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

setPhasePercent(double, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

setPhasePercent(double, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

setProperty(String, String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

setSelectedArea(Set<Area>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.AquaMapsObjectExecutionRequest

setSelectedSpecies(Set<Species>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

setSelectedSpecies(Set<Species>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.DistributionObjectExecutionRequest

setSerializedPath(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

setSourceGenerationTime(Date) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

setSourceTableName(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

setSourceTitle(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

setStartTime(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

setStartTime(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

setStartTime(int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

setStatus(SubmittedStatus, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.AnalysisTableManager

setSubmittedId(int) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.AquaMapsObjectData

setTableTitle(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

setThreshold(float) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.BiodiversityObjectExecutionRequest

setThreshold(long) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setTime(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setToAssociateStyles(List<String>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setToGenerateStyles(List<StyleGenerationRequest>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

setToGenerateTableCount(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

setType(ObjectType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.AquaMapsIsoMetadata

setTypeValue(Class) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

setUserCustomQuery(String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

setValueName(String) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.ReportItem

setWorkingHCAF(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

setWorkingHSPEC(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

setWorkingHSPEN(int, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

setWorkingTable(int, String, String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

signForGeneration(Execution) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

SimpleGenerator - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

SimpleGenerator(String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.SimpleGenerator

SimpleGeneratorI - Interface in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

SourceGenerationRequestsManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

SourceGenerationRequestsManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceGenerationRequestsManager

SourceImporter - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads

SourceImporter(String, Resource, Integer, char, boolean[], boolean, String) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.SourceImporter

SourceManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

SourceManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

species2HSPEN(Species) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.utils.ModelTranslation

SpeciesManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

SpeciesManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

speciesOccurSum - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

SpeciesStatus - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

start(Analysis) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisManager

start(Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.maps.JobExecutionManager

start(SourceGenerationRequest) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

StatefullCSVLineProcessor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads

StatefullCSVLineProcessor(List<Field>, Resource, Long, boolean[]) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.StatefullCSVLineProcessor

StatisticalModule - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical

StatusMonitorThread - Class in org.gcube.application.aquamaps.aquamapsservice.impl.monitor

StatusMonitorThread(long, long) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.monitor.StatusMonitorThread

stringToInputStream(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ParserXPath

StyleGenerationRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

StyleGenerationRequest() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest

StyleGenerationRequest.ClusterScaleType - Enum in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

submitExportOperation(String, String, String, String, ExportOperation, ExportCSVSettings) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.ExportManager

submitJob(Job) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.AquaMapsService

submitRequest(SourceGenerationRequest) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.statistical.StatisticalModule

SubmittedManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.db.managers

SubmittedManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

submittedTable - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

T

tableField - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

TableGenerationConfiguration - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions

TableGenerationConfiguration(LogicType, AlgorithmType, List<Resource>, String, String, String, HashMap<String, String>, int, String, ArrayList<Field>, HSPECGroupWorker) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

TableGenerationExecutionManager - Class in org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables

TableGenerationExecutionManager() - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.engine.tables.TableGenerationExecutionManager

TABLESPACE_COUNT - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

TABLESPACE_PREFIX - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

tableTypeField - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

tempFolders - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

tempFoldersFolderName - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

tempFoldersJobId - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

THREE_A_CODE - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

toDropTables - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

toDropTablesJobId - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

toDropTablesTableName - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

toJSon(ResultSet) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBUtils

toJSon(ResultSet, int, int) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBUtils

toJSon(ResultSet, Long) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBUtils

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.analysis.AnalysisRequest

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.TableGenerationConfiguration

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.LayerGenerationRequest

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DataSourceDescriptor

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.GeoServerDescriptor

toString() - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

U

update(Resource) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SourceManager

update(Submitted) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

update(T) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.Generator

updateDescriptor(CustomQueryDescriptor) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

updateField(int, SubmittedFields, FieldType, Object) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

updateGISData(int, Boolean) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

updateOperation(String, List<List<Field>>, List<List<Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession

updateOperation(String, List<List<Field>>, List<List<Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.MySQLDBSession

updateOperation(String, List<List<Field>>, List<List<Field>>) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.PostGresSQLDBSession

updateSpeciesStatus(int, String[], SpeciesStatus) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

updateStatus(int, SubmittedStatus) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SubmittedManager

Updates internal Status, in case of Error status updates published element as side effect

URLtoString(String) - Static method in class org.gcube.application.aquamaps.aquamapsservice.impl.util.ServiceUtils

userQueryTable - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.CustomQueryManager

V

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession.ALTER_OPERATION

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession.ENGINE

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesStatus

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.QueryConstructurThread.Operation

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory.BatchPoolType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest.ClusterScaleType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext.FOLDERS

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor.DBType

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession.ALTER_OPERATION

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.DBSession.ENGINE

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesStatus

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.threads.QueryConstructurThread.Operation

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.engine.predictions.BatchGeneratorObjectFactory.BatchPoolType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.StyleGenerationRequest.ClusterScaleType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.ServiceContext.FOLDERS

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.DBDescriptor.DBType

Returns an array containing the constants of this enum type, in the order they are declared.

viewCustomQuery(ViewCustomQueryRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

viewTable(ViewTableRequestType) - Method in class org.gcube.application.aquamaps.aquamapsservice.impl.DataManagement

VODescriptor - Class in org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig

VODescriptor(String, List<GeoServerDescriptor>, DataSourceDescriptor, DBDescriptor, DBDescriptor, DBDescriptor) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.util.isconfig.VODescriptor

W

WMSGenerationRequest - Class in org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis

WMSGenerationRequest(int) - Constructor for class org.gcube.application.aquamaps.aquamapsservice.impl.publishing.gis.WMSGenerationRequest

workingTables - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.JobManager

WORMS - Static variable in class org.gcube.application.aquamaps.aquamapsservice.impl.db.managers.SpeciesManager

A B C D E F G H I J L M N O P Q R S T U V W