A B C D E F G H I K L M N O P Q R S T U V W

A

AccessPointer - Class in org.gcube.data.simulfishgrowthdata.util

AccessPointer(String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.AccessPointer

add(ModelerFull) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

add(Session, ModelerFull) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

add(Session, ModelerFull, boolean) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

add(Modeler) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

add(Modeler, boolean) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

add(Session, Modeler) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

add(Session, Modeler, boolean) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

add(ScenarioFull) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

add(Session, ScenarioFull) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

add(Session, Scenario) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

add(Scenario) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

add(Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

add(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

addCondition(String) - Method in class org.gcube.data.simulfishgrowthdata.util.AccessPointer

addRecipient(String) - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

addValues(List<UnivariateOutlierDetector.IValue>) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

adjustFcrs(List<Fcr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

adjustMortalities(List<Mortality>) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

adjustSfrs(List<Sfr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

afterRun() - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

B

BaseUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

BaseUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.BaseUtil

beforeRun() - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

BroodstockQualityUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

BroodstockQualityUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.BroodstockQualityUtil

C

CalcKPIAlgorithmExecutor - Class in org.gcube.data.simulfishgrowthdata.util

CalcKPIAlgorithmExecutor(String, String, String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

cleanFromOutliers() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

cleanKPIs(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

cleanKPIs(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

cleanOutliers() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

cleanSampleData(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

cleanValues() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

cleanWeightLimits(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

closeSession(Session) - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

CommonWeightLimitsType() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

CommonWeightLimitsType(Integer, Double) - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

compare(Object, Object) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.SimpleValue

compareTo(Object) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.SimpleValue

complementOfRightInLeft(List<T>, List<T>) - Method in class org.gcube.data.simulfishgrowthdata.util.Utils

elements existing in left set only

config(String, String) - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

configGently(String, String) - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

ConnectionUtil - Class in org.gcube.data.simulfishgrowthdata.util

ConnectionUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.util.ConnectionUtil

ConnectionUtil.Status - Class in org.gcube.data.simulfishgrowthdata.util

ConsumptionScenarioExecutor - Class in org.gcube.data.simulfishgrowthdata.calc

setup executorbased on a database scenario

ConsumptionScenarioExecutor(Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.ConsumptionScenarioExecutor

ConsumptionScenarioExecutor(Session, Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.ConsumptionScenarioExecutor

COUNT_COLUMN_NAME - Static variable in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

create() - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

createRequest(URI) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

createRequest(URI) - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

createRequest(URI) - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

CurrentRatingUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

CurrentRatingUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.CurrentRatingUtil

D

DatabaseUtil - Class in org.gcube.data.simulfishgrowthdata.util

DatabaseUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.util.DatabaseUtil

debugLoadFromLocalXml - Static variable in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

defineLowerPercentage(Double) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

defineUpperPercentage(Double) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

delete(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

delete(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

delete(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

delete(Session, Modeler) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

delete(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

delete(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

delete(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

delete(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

delete(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

delete(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

delete(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

deleteAll(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.FcrUtil

deleteAll(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.FcrUtil

deleteAll(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.MortalityUtil

deleteAll(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.MortalityUtil

deleteAll(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SfrUtil

deleteAll(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SfrUtil

detectOutliers(UnivariateOutlierDetector.IValue[], Double, Double) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

detect outliers in values

E

entity - Variable in class org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify

EntityVerify<T extends gr.i2s.fishgrowth.model.EntityWithId> - Class in org.gcube.data.simulfishgrowthdata.model.verify

EntityVerify(T) - Constructor for class org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify

EntityVerify.VerifyException - Exception in org.gcube.data.simulfishgrowthdata.model.verify

ExcelDataReader - Class in org.gcube.data.simulfishgrowthdata.util

ExcelDataReader() - Constructor for class org.gcube.data.simulfishgrowthdata.util.ExcelDataReader

ExcelLimitsReader - Class in org.gcube.data.simulfishgrowthdata.util

ExcelLimitsReader() - Constructor for class org.gcube.data.simulfishgrowthdata.util.ExcelLimitsReader

ExcelReader - Class in org.gcube.data.simulfishgrowthdata.util

ExcelReader() - Constructor for class org.gcube.data.simulfishgrowthdata.util.ExcelReader

execute() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

execute(String) - Method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

execute() - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

executeConsumptionScenario(String, String, Integer, Integer, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

create a session and call executeConsumptionScenario(Session session, String from, String to, Integer weight, Integer count, Long modelId)

executeConsumptionScenario(Session, String, String, Integer, Integer, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

executeConsumptionScenario(String, String, Integer, Integer, String, String, Long, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

executeConsumptionScenario(Session, String, String, Integer, Integer, String, String, Long, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

executeScenario(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

executeScenario(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

if session is null then everyone who wants a session is responsible to create and release it

executeScenario(Session, Long, int) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

execute scenario based on KIND method

executeScenario(Session, Long, GlobalModelWrapper) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

explodeGlobalName(String) - Static method in class org.gcube.data.simulfishgrowthdata.util.DatabaseUtil

F

fcrs - Variable in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

FcrUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

FcrUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.FcrUtil

FeedQualityUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

FeedQualityUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.FeedQualityUtil

fillKPITable(Collection<? extends TableEntity>) - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

findSitesSimilarToMe(Session, Site, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

these are my similar, I am not included

findSitesSimilarToMeGradeA(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

grade A

findSitesSimilarToMeGradeB(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

findSitesSimilarToMeGradeC(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

findSitesSimilarToMeGradeD(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

findSitesSimilarToMeGradeE(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

findSitesSimilarToMeIncludingMe(Session, Site, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

findSubNode(String, Node, boolean) - Method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

findSubNode(String, Node) - Method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

G

GCubeUtils - Class in org.gcube.data.simulfishgrowthdata.util

GCubeUtils() - Constructor for class org.gcube.data.simulfishgrowthdata.util.GCubeUtils

getBar() - Method in class org.gcube.data.simulfishgrowthdata.api.base.Test

getBroodstockQualities() - Method in class org.gcube.data.simulfishgrowthdata.api.base.BroodstockQualityUtil

getCommonKPIValues(Session, Integer, Collection<Double>, Collection<Long>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getCommonWeightLimits(Session, Collection<Long>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getCountColumnName() - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

getCredentials(String, String) - Static method in class org.gcube.data.simulfishgrowthdata.util.GCubeUtils

getCurrentRatings() - Method in class org.gcube.data.simulfishgrowthdata.api.base.CurrentRatingUtil

getFcrs(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.FcrUtil

getFcrs(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.FcrUtil

getFeedQualities() - Method in class org.gcube.data.simulfishgrowthdata.api.base.FeedQualityUtil

getFoo() - Method in class org.gcube.data.simulfishgrowthdata.api.base.Test

getFriendlyTraceFrom(Throwable) - Static method in exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

getFromWeight() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

getFromWeight() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

getGlobal(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getIt() - Method in class org.gcube.data.simulfishgrowthdata.util.AccessPointer

getKpiKind() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

getModeler(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getModeler(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getModelerFull(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

getModelerFull(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

getModelerFullCount(String, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

getModelerFulls(String, Integer, Integer, List<Long>, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

getModelerFulls(String, List<Long>, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

getModelerIdsForSites(Session, Long, List<Long>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getModelers(String, List<Long>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getModelersForSite(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getMortalities(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.MortalityUtil

getMortalities(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.MortalityUtil

getMyId() - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

getOutliers() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

getOxygenRatings() - Method in class org.gcube.data.simulfishgrowthdata.api.base.OxygenRatingUtil

getPrefilledCredentials() - Static method in class org.gcube.data.simulfishgrowthdata.util.GCubeUtils

getRegions() - Method in class org.gcube.data.simulfishgrowthdata.api.base.RegionUtil

getResults() - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

getSampleData(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getScenario(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

getScenario(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

getScenarioFull(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

getScenarioFull(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

getScenarioFullCount(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

getScenarioFulls(String, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

getScenarioFulls(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

getScenarios(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

getSessionFactory() - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

getSfrs(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SfrUtil

getSfrs(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SfrUtil

getSimulModelId() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

getSite(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

getSite(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

getSiteAsGlobal(Session, Set<Long>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

getSiteFull(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

getSiteFullCount(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

getSiteFulls(String, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

getSiteFulls(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

getSiteFullSimilar(Session, Site, Integer, Integer, Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

getSites(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

getSites(Session, String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

getSpecieses() - Method in class org.gcube.data.simulfishgrowthdata.api.base.SpeciesUtil

getTemperature() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

getText(Node) - Static method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

getTrace(String) - Method in exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

getTrace() - Method in exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

getUniqueId() - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

getUsage(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

getUsage(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

getValue() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

getValue() - Method in interface org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.IValue

getValue() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.SimpleValue

getValues(String, String) - Method in interface org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper.IEnvValuesProvider

getValues() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

getWeightLimits(Session, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

GLOBAL_OWNER - Static variable in class org.gcube.data.simulfishgrowthdata.util.DatabaseUtil

GlobalModelConsumptionExecutor - Class in org.gcube.data.simulfishgrowthdata.calc

this executor relies on GlobalModelConsumptionExecutor.globalModel, rather the database, in order to get temperature and KPIs

GlobalModelConsumptionExecutor(Scenario, GlobalModelWrapper) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.GlobalModelConsumptionExecutor

GlobalModelScenarioExecutor - Class in org.gcube.data.simulfishgrowthdata.calc

this executor relies on GlobalModelScenarioExecutor.globalModel, rather the database, in order to get temperature and KPIs

GlobalModelScenarioExecutor(Scenario, GlobalModelWrapper) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

GlobalModelScenarioExecutor(Session, Scenario, GlobalModelWrapper) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

GlobalModelWrapper - Class in org.gcube.data.simulfishgrowthdata.model

GlobalModelWrapper(Session, String, String, Long, TemperatureRetriever, OxygenRetriever) - Constructor for class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

GlobalModelWrapper(Session, String, String, Long, TemperatureRetriever, OxygenRetriever, int, int) - Constructor for class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

GlobalModelWrapper(Session, Site, Long) - Constructor for class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

Called when we have a virtual site i.e.

GlobalModelWrapper(Session, Modeler) - Constructor for class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

called when we have an actual Modeler i.e.

GlobalModelWrapper.IEnvValuesProvider - Interface in org.gcube.data.simulfishgrowthdata.model

H

HibernateUtil - Class in org.gcube.data.simulfishgrowthdata.util

I

implodeGlobalName(Set<Long>) - Static method in class org.gcube.data.simulfishgrowthdata.util.DatabaseUtil

importData(Session, long, String, URL) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

importData(Session, long, String, File) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

importLocal(Session, long, String) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

importRemote(Session, long, String) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

importWorkbook(Session, long, String, Workbook) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelDataReader

importWorkbook(Session, long, String, Workbook) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelLimitsReader

importWorkbook(Session, long, String, Workbook) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

instance(int) - Static method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

intersection(List<T>, List<T>) - Method in class org.gcube.data.simulfishgrowthdata.util.Utils

common elements of left and right

isPrefilledDBCredentials() - Static method in class org.gcube.data.simulfishgrowthdata.util.GCubeUtils

isSuccess() - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor.Response

K

KIND_EXECUTOR_GLOBAL_MODEL - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

KIND_EXECUTOR_OWN_DATA - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

KIND_GET_GLOBAL_MODEL_ON_MODELER - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

KIND_GET_GLOBAL_MODEL_ON_SCENARIO - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

KIND_LIMITS - Static variable in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

KIND_SAMPLE - Static variable in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

KPIValuesType() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

KPIValuesType(Long, Integer, Double, Double) - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

L

limitLength(String, int) - Method in class org.gcube.data.simulfishgrowthdata.util.Utils

loadFcrs(List<Fcr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelConsumptionExecutor

loadFcrs(List<Fcr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

loadFcrs(List<Fcr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

loadModelTemperature() - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelConsumptionExecutor

loadModelTemperature() - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

loadModelTemperature() - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

loadMortalities(List<Mortality>) - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelConsumptionExecutor

loadMortalities(List<Mortality>) - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

loadMortalities(List<Mortality>) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

loadOxygen(Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

loadSfrs(List<Sfr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelConsumptionExecutor

loadSfrs(List<Sfr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

loadSfrs(List<Sfr>) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

logger - Static variable in class org.gcube.data.simulfishgrowthdata.util.ExcelDataReader

logger - Static variable in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

M

main(String[]) - Static method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

main(String[]) - Static method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

makeTemperatureTable() - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

makeUri() - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

makeUri() - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

makeUri() - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

markOutliers(Session, long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

MAX_TEMP - Static variable in class org.gcube.data.simulfishgrowthdata.model.verify.SiteVerify

median(Integer...) - Method in class org.gcube.data.simulfishgrowthdata.util.Utils

mEndpoint - Variable in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

message - Variable in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor.Response

MIN_TEMP - Static variable in class org.gcube.data.simulfishgrowthdata.model.verify.SiteVerify

ModelerFullUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

ModelerFullUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

ModelerUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

ModelerUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

ModelerUtil.CommonWeightLimitsType - Class in org.gcube.data.simulfishgrowthdata.api.base

ModelerUtil.KPIValuesType - Class in org.gcube.data.simulfishgrowthdata.api.base

ModelerVerify - Class in org.gcube.data.simulfishgrowthdata.model.verify

ModelerVerify(Modeler) - Constructor for class org.gcube.data.simulfishgrowthdata.model.verify.ModelerVerify

mortalities - Variable in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

MortalityUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

MortalityUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.MortalityUtil

mSession - Variable in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

N

normalise() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify

normalise() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.ModelerVerify

normalise() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.ScenarioVerify

normalise() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.SiteVerify

O

openSession() - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

openSession(SessionFactory) - Static method in class org.gcube.data.simulfishgrowthdata.util.HibernateUtil

org.gcube.data.simulfishgrowthdata.api.base - package org.gcube.data.simulfishgrowthdata.api.base

org.gcube.data.simulfishgrowthdata.calc - package org.gcube.data.simulfishgrowthdata.calc

org.gcube.data.simulfishgrowthdata.model - package org.gcube.data.simulfishgrowthdata.model

org.gcube.data.simulfishgrowthdata.model.verify - package org.gcube.data.simulfishgrowthdata.model.verify

org.gcube.data.simulfishgrowthdata.util - package org.gcube.data.simulfishgrowthdata.util

oxygenBiMonthly - Variable in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

OxygenRatingUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

OxygenRatingUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.OxygenRatingUtil

P

PostMessageExecutor - Class in org.gcube.data.simulfishgrowthdata.util

PostMessageExecutor(String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

prefillDBCredentials(String, String, String, String) - Static method in class org.gcube.data.simulfishgrowthdata.util.GCubeUtils

prefillDBCredentials(Map<String, String>) - Static method in class org.gcube.data.simulfishgrowthdata.util.GCubeUtils

prepareRequest(HttpUriRequest) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

prepareRequest(HttpUriRequest) - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

prepareRequest(HttpUriRequest) - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

processOutput(String) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

processOutput(String) - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

processOutput(String) - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

processResults() - Method in class org.gcube.data.simulfishgrowthdata.calc.ConsumptionScenarioExecutor

processResults() - Method in class org.gcube.data.simulfishgrowthdata.calc.GlobalModelScenarioExecutor

processResults() - Method in class org.gcube.data.simulfishgrowthdata.calc.WhatIfAnalysisExecutor

Q

quartile(UnivariateOutlierDetector.IValue[], Double) - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

R

rawSheet(Sheet) - Method in class org.gcube.data.simulfishgrowthdata.util.ExcelReader

debug purposes.

RedirectException(String) - Constructor for exception org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor.RedirectException

RegionUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

RegionUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.RegionUtil

Response() - Constructor for class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor.Response

result - Variable in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor.Response

S

SampleData - Class in org.gcube.data.simulfishgrowthdata.calc

SampleData() - Constructor for class org.gcube.data.simulfishgrowthdata.calc.SampleData

ScenarioExecutor - Class in org.gcube.data.simulfishgrowthdata.calc

setup executor based on a database scenario

ScenarioExecutor(Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

ScenarioExecutor(Session, Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

ScenarioFullUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

ScenarioFullUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

ScenarioUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

ScenarioUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

ScenarioVerify - Class in org.gcube.data.simulfishgrowthdata.model.verify

ScenarioVerify(Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.model.verify.ScenarioVerify

SeaBreamFCR - Static variable in class org.gcube.data.simulfishgrowthdata.calc.SampleData

SeaBreamMortality - Static variable in class org.gcube.data.simulfishgrowthdata.calc.SampleData

SeaBreamSFR - Static variable in class org.gcube.data.simulfishgrowthdata.calc.SampleData

SendMessageExecutor - Class in org.gcube.data.simulfishgrowthdata.util

SendMessageExecutor(String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

setAdditionalSimilarityConstraint(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

setAdditionalSimilarityConstraint(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

setAdditionalSimilarityConstraint(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

setAdditionalSimilarityConstraint(String) - Method in class org.gcube.data.simulfishgrowthdata.calc.WhatIfAnalysisExecutor

setAdditionalSimilarityConstraint(String) - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

setBar(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.Test

setBody(String) - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

setCache(Cache<String, String>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

setConnectionInfo(String, String, String, String) - Method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

setDoSave(boolean) - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

setEnableNotification(boolean) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

setFoo(String) - Method in class org.gcube.data.simulfishgrowthdata.api.base.Test

setFromWeight(Double) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

setFromWeight(Double) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

setKpiKind(Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

setModelId(String) - Method in class org.gcube.data.simulfishgrowthdata.util.CalcKPIAlgorithmExecutor

setOxygenProvider(GlobalModelWrapper.IEnvValuesProvider) - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

setOxygenRetriever(OxygenRetriever) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

setPreviewDescription(String) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

setPreviewTitle(String) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

setSimulModelId(Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

setSubject(String) - Method in class org.gcube.data.simulfishgrowthdata.util.SendMessageExecutor

setTemperature(Integer) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

setTemperatureProvider(GlobalModelWrapper.IEnvValuesProvider) - Method in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

setTemperatureRetriever(TemperatureRetriever) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

setText(String) - Method in class org.gcube.data.simulfishgrowthdata.util.PostMessageExecutor

setToken(String) - Method in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

Setup - Class in org.gcube.data.simulfishgrowthdata.util

Setup(String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.Setup

Setup(String, String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.Setup

Setup(String, String, String, String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.Setup

setValue(Double) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

sfrs - Variable in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

SfrUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

SfrUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.SfrUtil

SimilarSiteUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

SimilarSiteUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.SimilarSiteUtil

SimpleValue(Double) - Constructor for class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.SimpleValue

SiteFullUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

SiteFullUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.SiteFullUtil

SiteUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

SiteUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

SiteVerify - Class in org.gcube.data.simulfishgrowthdata.model.verify

SiteVerify(Site) - Constructor for class org.gcube.data.simulfishgrowthdata.model.verify.SiteVerify

SocialNetworkingExecutor - Class in org.gcube.data.simulfishgrowthdata.util

SocialNetworkingExecutor(String) - Constructor for class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor

SocialNetworkingExecutor.RedirectException - Exception in org.gcube.data.simulfishgrowthdata.util

SocialNetworkingExecutor.Response - Class in org.gcube.data.simulfishgrowthdata.util

SpeciesUtil - Class in org.gcube.data.simulfishgrowthdata.api.base

SpeciesUtil() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.SpeciesUtil

Status() - Constructor for class org.gcube.data.simulfishgrowthdata.util.ConnectionUtil.Status

STATUS_FAILED_KPI - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

STATUS_PENDING_KPI - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

STATUS_READY - Static variable in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

success - Variable in class org.gcube.data.simulfishgrowthdata.util.SocialNetworkingExecutor.Response

T

temperatureBiMonthly - Variable in class org.gcube.data.simulfishgrowthdata.model.GlobalModelWrapper

Test - Class in org.gcube.data.simulfishgrowthdata.api.base

Test() - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.Test

Test(String, String) - Constructor for class org.gcube.data.simulfishgrowthdata.api.base.Test

toString() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.CommonWeightLimitsType

toString() - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil.KPIValuesType

toString() - Method in class org.gcube.data.simulfishgrowthdata.calc.ConsumptionScenarioExecutor

toString() - Method in class org.gcube.data.simulfishgrowthdata.calc.ScenarioExecutor

toString() - Method in class org.gcube.data.simulfishgrowthdata.calc.WhatIfAnalysisExecutor

toString() - Method in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.SimpleValue

U

union(List<T>, List<T>) - Method in class org.gcube.data.simulfishgrowthdata.util.Utils

all elements of left and right

UnivariateOutlierDetector - Class in org.gcube.data.simulfishgrowthdata.model

UnivariateOutlierDetector() - Constructor for class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector

UnivariateOutlierDetector.IValue - Interface in org.gcube.data.simulfishgrowthdata.model

UnivariateOutlierDetector.SimpleValue - Class in org.gcube.data.simulfishgrowthdata.model

UNPROCESSABLE_ENTITY - Static variable in class org.gcube.data.simulfishgrowthdata.util.ConnectionUtil.Status

update(ModelerFull) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

update(ModelerFull, boolean) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerFullUtil

update(Modeler) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

update(Modeler, boolean) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

update(Session, Modeler, boolean) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

update(ScenarioFull) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioFullUtil

update(Scenario) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

update(Session, Scenario) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

update(Session, Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

update(Session, Site, Set<Long>) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

update(Site) - Method in class org.gcube.data.simulfishgrowthdata.api.base.SiteUtil

updateStatusOnSite(Session, Long, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ModelerUtil

updateStatusOnSite(Session, Long, Long) - Method in class org.gcube.data.simulfishgrowthdata.api.base.ScenarioUtil

UserFriendlyException - Exception in org.gcube.data.simulfishgrowthdata.util

UserFriendlyException() - Constructor for exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

UserFriendlyException(String, Throwable, boolean, boolean) - Constructor for exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

UserFriendlyException(String, Throwable) - Constructor for exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

UserFriendlyException(String) - Constructor for exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

UserFriendlyException(Throwable) - Constructor for exception org.gcube.data.simulfishgrowthdata.util.UserFriendlyException

Utils - Class in org.gcube.data.simulfishgrowthdata.util

Utils() - Constructor for class org.gcube.data.simulfishgrowthdata.util.Utils

V

value - Variable in class org.gcube.data.simulfishgrowthdata.model.UnivariateOutlierDetector.SimpleValue

verify() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify

verify() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.ModelerVerify

verify() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.ScenarioVerify

verify() - Method in class org.gcube.data.simulfishgrowthdata.model.verify.SiteVerify

VerifyException() - Constructor for exception org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify.VerifyException

VerifyException(String, Throwable, boolean, boolean) - Constructor for exception org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify.VerifyException

VerifyException(String, Throwable) - Constructor for exception org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify.VerifyException

VerifyException(String) - Constructor for exception org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify.VerifyException

VerifyException(Throwable) - Constructor for exception org.gcube.data.simulfishgrowthdata.model.verify.EntityVerify.VerifyException

W

WhatIfAnalysisExecutor - Class in org.gcube.data.simulfishgrowthdata.calc

WhatIfAnalysisExecutor(Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.WhatIfAnalysisExecutor

WhatIfAnalysisExecutor(Session, Scenario) - Constructor for class org.gcube.data.simulfishgrowthdata.calc.WhatIfAnalysisExecutor

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