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A

addCodeColumToTable(String) - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
addFeature(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
AddFileIdentifierForThreddsLayers - Class in org.gcube.dataanalysis.geo.batch
 
AddFileIdentifierForThreddsLayers() - Constructor for class org.gcube.dataanalysis.geo.batch.AddFileIdentifierForThreddsLayers
 
addInformationColumsToTable(String) - Method in class org.gcube.dataanalysis.geo.vti.EstimateFishingActivity
 
addInformationColumsToTable(String) - Method in class org.gcube.dataanalysis.geo.vti.EstimateMonthlyFishingEffort
 
addInformationColumsToTable(String) - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
addTinyVals - Static variable in class density.WorldImageProducer
 
adjustLat(float, int) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
adjustLon(float, int) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
adjustSampleRadius - Static variable in class density.WorldImageProducer
 
adjX(double) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
adjY(double) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
analyze() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
applyNearestNeighbor() - Method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
arrayByte2DArrayDouble(ArrayByte) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
arrayByte3DArrayDouble(ArrayByte) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
ASC - Class in org.gcube.dataanalysis.geo.connectors.asc
 
ASC() - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.ASC
 
ASCConverter - Class in org.gcube.dataanalysis.geo.matrixmodel
 
ASCConverter(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.ASCConverter
 
AscDataExplorer - Class in org.gcube.dataanalysis.geo.connectors.asc
 
AscDataExplorer(String) - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
ascFile - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
AscRaster - Class in org.gcube.dataanalysis.geo.connectors.asc
Represents my best guess at the ESRI ASCII raster format.
AscRaster() - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Creates an empty raster
AscRaster(double, double, double, double, double) - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Creates a raster from the given data
AscRaster(double[][], double, double, double, double, double) - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Creates a raster from the given data
AscRaster(int[][], double, double, double, double, double) - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Creates a raster from the given data
AscRasterReader - Class in org.gcube.dataanalysis.geo.connectors.asc
A class which reads an ESRI ASCII raster file into a Raster
AscRasterReader() - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscRasterReader
 
AscRasterWriter - Class in org.gcube.dataanalysis.geo.connectors.asc
Modified from java-esri-ascii
AscRasterWriter() - Constructor for class org.gcube.dataanalysis.geo.connectors.asc.AscRasterWriter
 
assignGridValuesToPoints(List<Tuple<Double>>, int, List<Double>, List<Tuple<Double>>, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
assignGridValuesToPoints2D(List<Tuple<Double>>, List<Double>, List<Tuple<Double>>, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
assignPointsValuesToGrid(List<Tuple<Double>>, int, List<Tuple<Double>>, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
Finds the best association between a grid of 3d points in a certain time instant and a set of 5 dimensional points.
associateValueToCoordinates(List<Tuple<Double>>, double[][]) - Static method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 

B

background - Variable in class density.WorldImageProducer
 
BaseLayerAddonMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
BaseLayerAddonMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.BaseLayerAddonMetadataInsertDev
 
BaseLayerAddonMetadataInsertProd - Class in org.gcube.dataanalysis.geo.batch
 
BaseLayerAddonMetadataInsertProd() - Constructor for class org.gcube.dataanalysis.geo.batch.BaseLayerAddonMetadataInsertProd
 
BaseLayerMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
BaseLayerMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.BaseLayerMetadataInsertDev
 
BaseLayerMetadataInsertProd - Class in org.gcube.dataanalysis.geo.batch
 
BaseLayerMetadataInsertProd() - Constructor for class org.gcube.dataanalysis.geo.batch.BaseLayerMetadataInsertProd
 
baseURL - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
Bathymetry - Class in org.gcube.dataanalysis.geo.vti.vesselsprocessing
 
Bathymetry(String) - Constructor for class org.gcube.dataanalysis.geo.vti.vesselsprocessing.Bathymetry
 
bathymetryClassification(int) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIClassificator
 
BBxLL - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
BBxLL - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
BBxLL - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
BBxUR - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
BBxUR - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
BBxUR - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
BByLL - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
BByLL - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
BByLL - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
BByUR - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
BByUR - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
BByUR - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
bdist - Variable in class density.WorldImageProducer
 
BioOracleMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
BioOracleMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.BioOracleMetadataInsertDev
 
black - Variable in class density.WorldImageProducer
 
blackandwhite - Variable in class density.WorldImageProducer
 
boundingBox - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
breakpoint - Variable in class density.WorldImageProducer
 
bufferSize - Static variable in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
build5DTuples(AlgorithmConfiguration, boolean) - Method in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
buildBoundingBox(double, double, double, double) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
buildGeometryFromCoordinates(List<double[]>) - Static method in class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
buildGetterString(String, String) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 
buildTopicString(String, String...) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 
buildwgetFile(String, List<String>, List<String>) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 

C

calculateFishingHours(String[], Date[]) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.FishingHoursCalculator
 
calculateMonthlyFishingEffort(List<Object>, Date, Date) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.MonthlyFishingEffortCalculator
 
calcZRange(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
categories - Static variable in class density.WorldImageProducer
 
cellsize - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
cellsize - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
changeScope2(String, String, String) - Static method in class org.gcube.dataanalysis.geo.batch.AddFileIdentifierForThreddsLayers
 
checkLayerInScope(String, String, String) - Static method in class org.gcube.dataanalysis.geo.batch.CheckLayerRetrieval
 
CheckLayerRetrieval - Class in org.gcube.dataanalysis.geo.batch
 
CheckLayerRetrieval() - Constructor for class org.gcube.dataanalysis.geo.batch.CheckLayerRetrieval
 
CLASS - Static variable in class density.WorldImageProducer
 
classColor - Variable in class density.WorldImageProducer
 
classify(Tuple<String>[]) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIClassificator
 
className - Variable in class density.WorldImageProducer
 
clean() - Method in class density.Maxent
 
close() - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.Bathymetry
 
close() - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
Closes the netCDF file.
cols - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
command(String, String) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
compute() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
compute(Point2D.Double[]) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.Bathymetry
 
connector - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
Extract raw values in a time instant according to a set of grid points and a bounding box
convertAtResolution(double, double, double) - Static method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
convertHalfDegree(double, double) - Static method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
convertToASC(String, String, int, double, double, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.ASCConverter
 
convertToASC(String, double[][], double, double, double, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.ASCConverter
 
convertToASC(String, String, int, double, double, double, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.ASCConverter
 
convertToASC(String, int) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
convertToGeoTiff(String) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
CopyStreamHandler - Class in org.gcube.dataanalysis.geo.utils.transfer
 
correctZ(double, String, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
coverage - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
createBasicMeta(String[], String[]) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
createCharts(String[], String, String, List<Object>, boolean) - Method in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
createCharts(String[], String, String, List<Object>, boolean) - Method in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
createDefaultOptions(String, int) - Static method in class org.gcube.dataanalysis.geo.utils.transfer.Utils
 
createEEZWeightedImage(String, List<GeoTemporalPoint>, String, String) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createEEZWeightedImageInTime(String, List<GeoTemporalPoint>, String, String, boolean) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createFAOAreasWeightedImage(String, List<GeoTemporalPoint>, String, String) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createFAOAreasWeightedImageInTime(String, List<GeoTemporalPoint>, String, String, boolean) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createImageInTime(String, String, List<GeoTemporalPoint>, String, String, boolean) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createPointsImageInTime(String, List<GeoTemporalPoint>, String, String) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createWeightedImage(String, List<GeoTemporalPoint>, String, String, boolean, Date, HashMap<Double, Double>) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createWorldImageWithPoints(String, List<GeoTemporalPoint>, String) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createWorldImageWithPointsAndFixedTime(String, List<GeoTemporalPoint>, String, Date) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createWorldWeightedImage(String, List<GeoTemporalPoint>, String, String, Date, HashMap<Double, Double>) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
createWorldWeightedImageInTime(String, List<GeoTemporalPoint>, String, String, boolean) - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
crs - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
CrsHelper - Class in org.gcube.dataanalysis.geo.utils
This class wraps the GeoTools/GeoAPI coordinate reference system methods, providing a set of convenience methods such as transformations and validity checks.
crsToLatLon(double, double) - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
Transforms the given x-y point in this CRS to a LatLonPoint.
crsToLatLon(ProjectionPoint) - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
Transforms the given x-y point in this CRS to a LatLonPoint.
CSquare2Coordinates - Class in org.gcube.dataanalysis.geo.vti
 
CSquare2Coordinates() - Constructor for class org.gcube.dataanalysis.geo.vti.CSquare2Coordinates
 
CSquareCodesConverter - Class in org.gcube.dataanalysis.geo.utils
 
CSquareCodesConverter() - Constructor for class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
csquareColumn - Static variable in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
CSquaresCreator - Class in org.gcube.dataanalysis.geo.algorithms
 
CSquaresCreator() - Constructor for class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
CSV2ESRIGRID - Class in org.gcube.dataanalysis.geo.utils
 
CSV2ESRIGRID() - Constructor for class org.gcube.dataanalysis.geo.utils.CSV2ESRIGRID
 
currentconnector - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
currentcoordinates5d - Variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
currentLat - Variable in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
currentLong - Variable in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
currentRes - Variable in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
currentResolution - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
currentTimes - Variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
currentTimeValues - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
currentTuples - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
customMetaDataInsert(String[], String[]) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
customMetaDataInsert(String[], String[], boolean) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 

D

data - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
DEFAULT_NODATA - Static variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
defaultPrevalence - Variable in class density.Maxent
 
defaultSampleRadius - Static variable in class density.WorldImageProducer
 
deleteTable() - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
density - package density
 
depth - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
dichromatic - Variable in class density.WorldImageProducer
 
dichromaticColors - Variable in class density.WorldImageProducer
 
distance(double, double, double, double, double, double, double, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
divisor - Static variable in class density.WorldImageProducer
 
doOne(GridCoordinate2D, double, double) - Static method in class ucar.nc2.dt.grid.GridCoordinate2D
 
downloadData(String, String) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 
Downloader - Class in org.gcube.dataanalysis.geo.batch
Analyzes each row of a file and searches for links inside the file In the end builds a wget file to be run
Downloader() - Constructor for class org.gcube.dataanalysis.geo.batch.Downloader
 
dumpGeoTable() - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
dx - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
dx - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
dy - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
dy - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 

E

enrichfiles(List<String>) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 
environmentalLayersLocation - Variable in class density.Maxent
 
EnvriLayersInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
EnvriLayersInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.EnvriLayersInsertDev
 
envVariables - Variable in class density.Maxent
 
ESRIGRIDExtraction - Class in org.gcube.dataanalysis.geo.algorithms
 
ESRIGRIDExtraction() - Constructor for class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
EstimateFishingActivity - Class in org.gcube.dataanalysis.geo.vti
 
EstimateFishingActivity() - Constructor for class org.gcube.dataanalysis.geo.vti.EstimateFishingActivity
 
EstimateMonthlyFishingEffort - Class in org.gcube.dataanalysis.geo.vti
 
EstimateMonthlyFishingEffort() - Constructor for class org.gcube.dataanalysis.geo.vti.EstimateMonthlyFishingEffort
 
ExecuteGetLine(String) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
executeMaxEnt() - Method in class density.Maxent
 
executeNode(int, int, int, int, boolean, String, String, String) - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
expectedFrequencyError - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
expectedFrequencyErrorValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
extractT(String, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.TimeSeriesExtractor
Extracts an observations signal for a certain point in space
extractT(String) - Method in class org.gcube.dataanalysis.geo.matrixmodel.TimeSeriesExtractor
Extract observations in time with 0 resolution
extractXYGrid(String, int, double, double, double, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.XYExtractor
 
extractXYGridWithFixedTZ(String, int, double, double, double, double, double, double, double, boolean) - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
Extract a grid of XY points with fixed time and z
extractXYZT(String, double, double, double, int, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.PointsExtractor
 
extractZ(String, double, double, int, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.ZExtractor
 

F

FAOOceanArea(int, double, double, int) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
FAOOceanAreaConverter - Class in org.gcube.dataanalysis.geo.utils
 
FAOOceanAreaConverter() - Constructor for class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
FAOOceanAreaCreator - Class in org.gcube.dataanalysis.geo.algorithms
 
FAOOceanAreaCreator() - Constructor for class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreator
 
FAOOceanAreaCreatorQuadrant - Class in org.gcube.dataanalysis.geo.algorithms
 
FAOOceanAreaCreatorQuadrant() - Constructor for class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreatorQuadrant
 
FeaturedPolygon - Class in org.gcube.dataanalysis.geo.connectors.wfs
 
FeaturedPolygon() - Constructor for class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
features - Variable in class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
fetch(String) - Method in class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 
FFTSamples - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
FFTSamplesParam - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
FileCopy(String, String) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
filterParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
findCoordElement(double, double, int[]) - Method in class ucar.nc2.dt.grid.GridCoordinate2D
 
findCoordElementForce(double, double, int[]) - Method in class ucar.nc2.dt.grid.GridCoordinate2D
 
findCoordElementNoForce(double, double, int[]) - Method in class ucar.nc2.dt.grid.GridCoordinate2D
Find the best index for the given lat,lon point.
FishingHoursCalculator - Class in org.gcube.dataanalysis.geo.vti.vesselsprocessing
 
FishingHoursCalculator() - Constructor for class org.gcube.dataanalysis.geo.vti.vesselsprocessing.FishingHoursCalculator
 
format - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
fromCrsCode(String) - Static method in class org.gcube.dataanalysis.geo.utils.CrsHelper
 

G

GdalConverter - Class in org.gcube.dataanalysis.geo.utils
 
GdalConverter() - Constructor for class org.gcube.dataanalysis.geo.utils.GdalConverter
 
generateAbstractField(String, String, String, String, String, String, String, String, int, String, String) - Static method in class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 
generateCoordinateTripletsInBoundingBox(double, double, double, double, double, double, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
generateCoordinateTripletsInBoundingBox_old(double, double, double, double, double, double, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
generateEmptyValues(int) - Static method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
generateEmptyValues(int) - Static method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
generateGaussian(double, double) - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
generateRandomWorldPoints() - Static method in class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
generateTitle(String, String, String, String, int) - Static method in class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 
GenericLayerMetadata - Class in org.gcube.dataanalysis.geo.meta
 
GenericLayerMetadata() - Constructor for class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
GeoMapChart - Class in org.gcube.dataanalysis.geo.charts
 
GeoMapChart() - Constructor for class org.gcube.dataanalysis.geo.charts.GeoMapChart
 
GeoNetworkInspector - Class in org.gcube.dataanalysis.geo.infrastructure
 
GeoNetworkInspector() - Constructor for class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
GeospatialDataPublicationLevel - Enum in org.gcube.dataanalysis.geo.utils
 
GeoTemporalPoint - Class in org.gcube.dataanalysis.geo.charts
 
GeoTemporalPoint(double, double, double, double, String) - Constructor for class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
GeoTemporalPoint(double, double, String) - Constructor for class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
GeoTemporalPoint(double, double, double, String) - Constructor for class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
GeoTemporalPoint(double, double, double) - Constructor for class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
GeothermalDataMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
GeothermalDataMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertDev
 
GeothermalDataMetadataInsertFrance - Class in org.gcube.dataanalysis.geo.batch
 
GeothermalDataMetadataInsertFrance() - Constructor for class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertFrance
 
GeothermalDataMetadataInsertHungary - Class in org.gcube.dataanalysis.geo.batch
 
GeothermalDataMetadataInsertHungary() - Constructor for class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertHungary
 
GeothermalDataMetadataInsertItaly - Class in org.gcube.dataanalysis.geo.batch
 
GeothermalDataMetadataInsertItaly() - Constructor for class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertItaly
 
GeothermalDataMetadataInsertSlovenia - Class in org.gcube.dataanalysis.geo.batch
 
GeothermalDataMetadataInsertSlovenia() - Constructor for class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertSlovenia
 
GeothermalDataMetadataInsertSwitzerland - Class in org.gcube.dataanalysis.geo.batch
 
GeothermalDataMetadataInsertSwitzerland() - Constructor for class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertSwitzerland
 
GeoTiff - Class in org.gcube.dataanalysis.geo.connectors.geotiff
 
GeoTiff(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
GeoTiffMetadata - Class in org.gcube.dataanalysis.geo.utils
 
GeoTiffMetadata() - Constructor for class org.gcube.dataanalysis.geo.utils.GeoTiffMetadata
 
GeoTiffMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
GeoTiffMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.GeoTiffMetadataInsertDev
 
geoTiffUrl - Variable in class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
getAbstractField() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getAbstractField() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getAllGNInfobyText(String, String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getAllGNInfobyTitle(String, String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getASCLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getAuthor() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getAuthor() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getBestComparisonResolution(MatrixExtractor, String, String) - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
getBestThr() - Method in class density.Maxent
 
getBounding(int, double) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
getCategoryTypes() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getCellsize() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getCenterLat(float, float, int) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
getCenterLon(float, float, int) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
getCols() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getConnectiontimeout() - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
getConnector(String, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
getContactInfo() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getContactInfo() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getCoordinateReferenceSystem() - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
 
getCoordinates() - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
getCurrentConnector() - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
getCurrentLat() - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
getCurrentLong() - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
getCurrentResolution() - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
getCustomTopics() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getCustomTopics() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getData() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Returns the underlying data array - NOTE: this is *NOT* a copy, if you change it, you change the data
getDefaultParameters() - Static method in class density.Maxent
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreator
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreatorQuadrant
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.PointsMapsCreator
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.PolygonMapsCreator
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.RasterDataPublisher
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.ShapefilePublisher
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromCsquares
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromPoints
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtractionTable
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtractionTable
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
getDescription() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtractionTable
 
getDescription(String) - Static method in class org.gcube.dataanalysis.geo.batch.AddFileIdentifierForThreddsLayers
 
getDescription(String) - Static method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getDescription() - Method in class org.gcube.dataanalysis.geo.vti.CSquare2Coordinates
 
getDescription() - Method in class org.gcube.dataanalysis.geo.vti.EstimateFishingActivity
 
getDescription() - Method in class org.gcube.dataanalysis.geo.vti.EstimateMonthlyFishingEffort
 
getDescription() - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
getDimensions() - Method in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
getDimensions() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
getDistanceFromCenter(double, double) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
getdx() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getdy() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getEndDate() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getEndDate() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getFeaturer() - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
getFeatures(String, String, double, double) - Static method in class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
getFeatures(String, String, double, double, double, double) - Static method in class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.ASC
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDF
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.table.Table
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.wfs.WFS
 
getFeaturesInTimeInstantAndArea(String, String, int, List<Tuple<Double>>, double, double, double, double) - Method in interface org.gcube.dataanalysis.geo.interfaces.GISDataConnector
 
getfiles(String, String, String, String) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 
getFiles(String) - Static method in class org.gcube.dataanalysis.geo.utils.ThreddsExplorer
 
getGeonetworkGroup() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getGeonetworkPasswordFromScope() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkPrivateGroup() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkPublicGroup() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkPwd() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkPwd() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getGeonetworkPwd() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getGeonetworkUrl() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkUrl() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getGeonetworkUrl() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getGeonetworkURLFromScope() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkUser() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeonetworkUser() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getGeonetworkUser() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getGeonetworkUserFromScope() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeoserverLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGeoserverUrl() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getGeoTiffLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGNInfobyUUIDorName(String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getGrid(String, String) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
getHttpLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getInfrastructure() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getInfrastructure() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getInfrastructure() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getInfrastructure() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtractionTable
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtractionTable
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
getInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtractionTable
 
getInputStream(URI, int) - Static method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
getInstance() - Static method in class org.gcube.dataanalysis.geo.utils.transfer.HttpFileSystemConfBuilderPatched
 
getInternalStatus() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getInvertedAxisData() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getLayerName(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getLayerName() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getLayerName() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getLayerUrl() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getMaxEffort() - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.MonthlyFishingEffortCalculator
 
getMaxX(GridCoordSystem) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
getMaxY(GridCoordSystem) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
getMaxZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.asc.ASC
 
getMaxZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
getMaxZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDF
 
getMaxZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.table.Table
 
getMaxZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
getMaxZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.wfs.WFS
 
getMaxZ(String, String) - Method in interface org.gcube.dataanalysis.geo.interfaces.GISDataConnector
 
getMinEffort() - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.MonthlyFishingEffortCalculator
 
getMinX(GridCoordSystem) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
getMinY(GridCoordSystem) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
getMinZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.asc.ASC
 
getMinZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
getMinZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDF
 
getMinZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.table.Table
 
getMinZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
getMinZ(String, String) - Method in class org.gcube.dataanalysis.geo.connectors.wfs.WFS
 
getMinZ(String, String) - Method in interface org.gcube.dataanalysis.geo.interfaces.GISDataConnector
 
getName() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getName(String, String, String, String) - Static method in class org.gcube.dataanalysis.geo.batch.AddFileIdentifierForThreddsLayers
 
getName(String, String, String, String) - Static method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getNDATA() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getNumberOfLeftElements() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getNumberOfRightElements() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getOmissionPlot() - Method in class density.Maxent
 
getOpenDapLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getOpenDapURL(String, String) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getOutput() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
getOutput() - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
getParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
getParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
getPolygonsFeatures() - Method in class org.gcube.dataanalysis.geo.connectors.wfs.WFS
 
getPreferredSize() - Method in class density.WorldImageProducer
 
getPrevalence() - Method in class density.Maxent
 
getProcessdescription() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getProcessdescription() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getProperties() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
getProtocol(String) - Static method in class org.gcube.dataanalysis.geo.batch.AddFileIdentifierForThreddsLayers
 
getProtocol(String) - Static method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getPurpose() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getPurpose() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getQuadrant(double, double) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
getRawValuesInTimeInstantAndBoundingBox(String, int, List<Tuple<Double>>, double, double, double, double, double) - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
getRawValuesInTimeInstantAndBoundingBox(String, int, List<Tuple<Double>>, double, double, double, double, double, boolean) - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
getResolution(String, String) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
getResolution(Metadata) - Static method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getResolution() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getResolution() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getResolutionChar(int) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
getResolutionX(char) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
getResolutionY(char) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
getResourceLoad() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getResourceLoad() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getResourceLoad() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getResourceLoad() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getResources() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getResources() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getResources() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getResources() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getResult() - Method in class density.Maxent
 
getROCPlot() - Method in class density.Maxent
 
getRows() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getScope() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getSourceFileName() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getSourceGenerationDate() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getSourceGenerationDate() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getSpeciesName() - Method in class density.Maxent
 
getStartDate() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getStartDate() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getStatus() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
getStatus() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
getStatus() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
getStatus() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
getStatus() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
getTablename() - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
getTempRaster(double[][], double, double, double) - Static method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getTempRaster(double[][], double, double, double, String) - Static method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getThreddsCatalogUrl() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getThreddsLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getTimeout(FileSystemOptions) - Method in class org.gcube.dataanalysis.geo.utils.transfer.HttpFileSystemConfBuilderPatched
 
getTitle() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getTitle() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getTransferTimeout() - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
getUsageField() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getUsageField() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getUsageLimitations() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getUsageLimitations() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getValue(int, int) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getVariablesContributions() - Method in class density.Maxent
 
getVariablesPermutationsImportance() - Method in class density.Maxent
 
getWarnings() - Method in class density.Maxent
 
getWCSLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getWcsNetCDFUrl(String, String, String) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getWcsUrl(String, String, String) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getWcsUrl(String, String, String, String, String, String, String, String, String, String, String, String, String, HashMap<String, String>) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getWFSLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getWfsUrl(String, String, String, int, String) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getWMSLink(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
getWmsNetCDFUrl(String, String, String) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getWmsUrl(String, String, String, String) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
getWorldPlot() - Method in class density.Maxent
 
getXLeftLow() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getXLeftLow() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getXll() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getXRightUpper() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getXRightUpper() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getYLeftLow() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getYLeftLow() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getYll() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
getYRightUpper() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
getYRightUpper() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
getZ(Point2D.Double) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
Returns the altimetric/bathymetric value of the given geographical coordinates.
getZ(Point2D.Double[]) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
Returns the altimetric/bathymetric values of the given array of geographical coordinates.
getZ(double, double) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
Returns the altimetric/bathymetric value of the given geographical coordinates.
GISDataConnector - Interface in org.gcube.dataanalysis.geo.interfaces
 
globalASCIIMap(List<Double>, double, double) - Static method in class org.gcube.dataanalysis.geo.utils.MapUtils
 
globalASCIIMap(double[][]) - Static method in class org.gcube.dataanalysis.geo.utils.MapUtils
 
grid - Variable in class density.WorldImageProducer
 
GRID_COLS - Variable in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
 
GRID_ROWS - Variable in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
 
gridCodeToPair(String) - Method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
GridCoordinate2D - Class in ucar.nc2.dt.grid
2D Coordinate System has lat(x,y) and lon(x,y).
GridCoordinate2D(CoordinateAxis2D, CoordinateAxis2D) - Constructor for class ucar.nc2.dt.grid.GridCoordinate2D
 
GridCWP2Coordinates - Class in org.gcube.dataanalysis.geo.vti
 
GridCWP2Coordinates() - Constructor for class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
GridCWPConverter - Class in org.gcube.dataanalysis.geo.utils
 
GridCWPConverter() - Constructor for class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
gridnull - Variable in class density.WorldImageProducer
 
gridresolution - Variable in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
guessTopicCategory(String) - Static method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
guessTopicCategory(String) - Static method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 

H

height - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
HttpFileSystemConfBuilderPatched - Class in org.gcube.dataanalysis.geo.utils.transfer
Patched version declaring timeout
HttpFileSystemConfBuilderPatched(String) - Constructor for class org.gcube.dataanalysis.geo.utils.transfer.HttpFileSystemConfBuilderPatched
 
HttpFileSystemConfBuilderPatched() - Constructor for class org.gcube.dataanalysis.geo.utils.transfer.HttpFileSystemConfBuilderPatched
 
HumanDateFormat - Static variable in class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 

I

idColumn - Static variable in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
img - Variable in class density.WorldImageProducer
 
InfoRetrievalQuery(String, String[], String, String) - Method in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
InfoRetrievalQuery(String, String[], String, String) - Method in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.PointsMapsCreator
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.PolygonMapsCreator
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.RasterDataPublisher
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.ShapefilePublisher
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromCsquares
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromPoints
 
init() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
init(AscRaster) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Sets the parameters of this raster (rows, columns, corner, cellsize, NDATA etc) to be the same as the other raster.
init(double, double, double, double, double, double, double, double, double[][], HashMap<Double, Map<String, String>>, AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
init() - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
init() - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.Bathymetry
 
initData() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Initialises the Raster to Double.NaN (i.e.
initData(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Initialises the raster so the entire data array contains 'value'
initGeoNetworkReader() - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
initialTimeLabel - Variable in class density.WorldImageProducer
 
initInstance(String) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.Bathymetry
 
initSingleNode(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
inputs - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
inputs - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
inputs - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
inputs - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
insertGeoChunksIntoTable(String, String, List<String[]>, int, SessionFactory) - Static method in class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
insertMetaData() - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
insertMetaData() - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
insertMetaData(String, String, String, boolean) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
isAscFile(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
isDataset(String) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
isDataset(String) - Static method in class org.gcube.dataanalysis.geo.utils.ThreddsExplorer
 
isGeoTiff(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
isGridDataset(String) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
isGridDataset(String) - Static method in class org.gcube.dataanalysis.geo.utils.ThreddsExplorer
 
isLatLon() - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
 
isNetCDFFile(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
isPointDataset(String) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
isPointDataset(String) - Static method in class org.gcube.dataanalysis.geo.utils.ThreddsExplorer
 
isPointValidForCrs(ProjectionPoint) - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
 
isPointValidForCrs(double, double) - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
 
isTable() - Method in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
isWCS(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
isWFS(Metadata) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 

J

JsonMapper - Class in org.gcube.dataanalysis.geo.utils
Transforms a JSON into a map of key and values Some values could be structured objects like HashMaps that will be transformed into strings
JsonMapper() - Constructor for class org.gcube.dataanalysis.geo.utils.JsonMapper
 

L

latitude2Index(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
latitudeParameter - Static variable in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
latitudeParameter - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
latLonToCrs(LatLonPoint) - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
Transforms the given LatLonPoint to an x-y point in this CRS.
latLonToCrs(double, double) - Method in class org.gcube.dataanalysis.geo.utils.CrsHelper
Transforms the given longitude-latitude point to an x-y point in this CRS.
layerName - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
layerNameValue - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
layerURL - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
linecol - Variable in class density.WorldImageProducer
 
linerow - Variable in class density.WorldImageProducer
 
LOG - Static variable in class density.WorldImageProducer
 
longitude2Index(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
longitudeParameter - Static variable in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
longitudeParameter - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 

M

main(String[]) - Static method in class density.Maxent
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.algorithms.PolygonMapsCreator
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromCsquares
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromPoints
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.AddFileIdentifierForThreddsLayers
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.BaseLayerAddonMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.BaseLayerAddonMetadataInsertProd
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.BaseLayerMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.BaseLayerMetadataInsertProd
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.BioOracleMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.CheckLayerRetrieval
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.Downloader
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.EnvriLayersInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertFrance
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertHungary
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertItaly
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertSlovenia
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeothermalDataMetadataInsertSwitzerland
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.GeoTiffMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.OpenBioMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.OscarMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.OscarMetadataInsertProd
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.ThreddsMetadataBatchInserter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.WCSMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.WorldClimLZWMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.WorldClimNoCompressionMetadataInsertDev
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterReader
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.matrixmodel.ASCConverter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.CrsHelper
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.CSV2ESRIGRID
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.GeoTiffMetadata
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.Bathymetry
 
main(String[]) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
The class can also be used as command-line tool.
main(String[]) - Static method in class ucar.nc2.dt.grid.GridCoordinate2D
 
main1(String[]) - Static method in class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
main1(String[]) - Static method in class org.gcube.dataanalysis.geo.utils.GdalConverter
 
main2(String[]) - Static method in class org.gcube.dataanalysis.geo.batch.CheckLayerRetrieval
 
main2(String[]) - Static method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
makeImage() - Method in class density.WorldImageProducer
 
makeLegend - Variable in class density.WorldImageProducer
 
makeNorth - Static variable in class density.WorldImageProducer
 
makeTimeline - Variable in class density.WorldImageProducer
 
manageGridDataset(String, String, int, List<Tuple<Double>>) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
manageGridDataset(String, String, double, double, double) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
managePointsDataset(String, String, double, double) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
MapsComparator - Class in org.gcube.dataanalysis.geo.algorithms
 
MapsComparator() - Constructor for class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
MapsComparatorNode - Class in org.gcube.dataanalysis.geo.algorithms
 
MapsComparatorNode() - Constructor for class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
MapsCreator - Class in org.gcube.dataanalysis.geo.algorithms
 
MapsCreator() - Constructor for class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
MapUtils - Class in org.gcube.dataanalysis.geo.utils
 
MapUtils() - Constructor for class org.gcube.dataanalysis.geo.utils.MapUtils
 
MatrixExtractor - Class in org.gcube.dataanalysis.geo.matrixmodel
 
MatrixExtractor(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
max - Variable in class density.WorldImageProducer
 
maxborder - Variable in class density.WorldImageProducer
 
Maxent - Class in density
 
Maxent(String, String, String, int, double, int) - Constructor for class density.Maxent
 
MaxEnt4NicheModellingTransducer - Class in org.gcube.dataanalysis.geo.algorithms
 
MaxEnt4NicheModellingTransducer() - Constructor for class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
maxFracDigits - Static variable in class density.WorldImageProducer
 
maxFrequency - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
maxFrequencyValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
maxIterations - Variable in class density.Maxent
 
maxSignalLength - Static variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
maxTimeIntervals - Variable in class density.WorldImageProducer
 
maxval - Variable in class density.WorldImageProducer
 
maxx - Variable in class density.WorldImageProducer
 
maxy - Variable in class density.WorldImageProducer
 
maxZ - Variable in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
maxZ - Variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
maxzLength - Static variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
meta2File(Metadata) - Static method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
MetadataInsertDevExample - Class in org.gcube.dataanalysis.geo.batch
 
MetadataInsertDevExample() - Constructor for class org.gcube.dataanalysis.geo.batch.MetadataInsertDevExample
 
min - Variable in class density.WorldImageProducer
 
minFrequency - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
minFrequencyValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
minval - Variable in class density.WorldImageProducer
 
minx - Variable in class density.WorldImageProducer
 
miny - Variable in class density.WorldImageProducer
 
minZ - Variable in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
minZ - Variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
mode - Variable in class density.WorldImageProducer
 
MonthlyFishingEffortCalculator - Class in org.gcube.dataanalysis.geo.vti.vesselsprocessing
 
MonthlyFishingEffortCalculator() - Constructor for class org.gcube.dataanalysis.geo.vti.vesselsprocessing.MonthlyFishingEffortCalculator
 

N

ncolumns - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
NDATA - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
NetCDF - Class in org.gcube.dataanalysis.geo.connectors.netcdf
 
NetCDF(String, String) - Constructor for class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDF
 
NetCDFDataExplorer - Class in org.gcube.dataanalysis.geo.connectors.netcdf
 
NetCDFDataExplorer(String, String) - Constructor for class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
NetCDFDateFormat - Static variable in class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 
NetCDFMetadata - Class in org.gcube.dataanalysis.geo.meta
 
NetCDFMetadata() - Constructor for class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
noDataValue - Variable in class density.Maxent
 
nrows - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
numCategories - Static variable in class density.WorldImageProducer
 

O

OccurrenceEnrichment - Class in org.gcube.dataanalysis.geo.algorithms
 
OccurrenceEnrichment() - Constructor for class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
OGCFormatter - Class in org.gcube.dataanalysis.geo.meta
 
OGCFormatter() - Constructor for class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
open() - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
Opens the netCDF file and loads the data array.
OpenBioMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
OpenBioMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.OpenBioMetadataInsertDev
 
org.gcube.dataanalysis.geo.algorithms - package org.gcube.dataanalysis.geo.algorithms
 
org.gcube.dataanalysis.geo.batch - package org.gcube.dataanalysis.geo.batch
 
org.gcube.dataanalysis.geo.charts - package org.gcube.dataanalysis.geo.charts
 
org.gcube.dataanalysis.geo.connectors.asc - package org.gcube.dataanalysis.geo.connectors.asc
 
org.gcube.dataanalysis.geo.connectors.geotiff - package org.gcube.dataanalysis.geo.connectors.geotiff
 
org.gcube.dataanalysis.geo.connectors.netcdf - package org.gcube.dataanalysis.geo.connectors.netcdf
 
org.gcube.dataanalysis.geo.connectors.table - package org.gcube.dataanalysis.geo.connectors.table
 
org.gcube.dataanalysis.geo.connectors.wcs - package org.gcube.dataanalysis.geo.connectors.wcs
 
org.gcube.dataanalysis.geo.connectors.wfs - package org.gcube.dataanalysis.geo.connectors.wfs
 
org.gcube.dataanalysis.geo.infrastructure - package org.gcube.dataanalysis.geo.infrastructure
 
org.gcube.dataanalysis.geo.insertion - package org.gcube.dataanalysis.geo.insertion
 
org.gcube.dataanalysis.geo.interfaces - package org.gcube.dataanalysis.geo.interfaces
 
org.gcube.dataanalysis.geo.matrixmodel - package org.gcube.dataanalysis.geo.matrixmodel
 
org.gcube.dataanalysis.geo.meta - package org.gcube.dataanalysis.geo.meta
 
org.gcube.dataanalysis.geo.utils - package org.gcube.dataanalysis.geo.utils
 
org.gcube.dataanalysis.geo.utils.transfer - package org.gcube.dataanalysis.geo.utils.transfer
 
org.gcube.dataanalysis.geo.vti - package org.gcube.dataanalysis.geo.vti
 
org.gcube.dataanalysis.geo.vti.vesselsprocessing - package org.gcube.dataanalysis.geo.vti.vesselsprocessing
 
OscarMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
OscarMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.OscarMetadataInsertDev
 
OscarMetadataInsertProd - Class in org.gcube.dataanalysis.geo.batch
 
OscarMetadataInsertProd() - Constructor for class org.gcube.dataanalysis.geo.batch.OscarMetadataInsertProd
 
outlat - Variable in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
outlon - Variable in class org.gcube.dataanalysis.geo.utils.GridCWPConverter
 
outputDirectory - Variable in class density.Maxent
 
outputParameters - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
outputParameters - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
outputParameters - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
outputParameters - Variable in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
outputParameters - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 

P

p - Variable in class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
padLatitude(int) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
padLongitude(int) - Method in class org.gcube.dataanalysis.geo.utils.FAOOceanAreaConverter
 
paint(Graphics) - Method in class density.WorldImageProducer
 
parameters - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
parse(String) - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
parse(String) - Static method in class org.gcube.dataanalysis.geo.utils.JsonMapper
 
parseWCSURL(String) - Method in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
pd - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
performTransfer(URI, String) - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
performTransferToFolder(URI, String) - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
persistenceDir - Variable in class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
persistenceDir - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
pixels - Variable in class density.WorldImageProducer
 
PLAIN - Static variable in class density.WorldImageProducer
 
PLATE_CARREE_CRS_CODE - Static variable in class org.gcube.dataanalysis.geo.utils.CrsHelper
 
PointsExtractor - Class in org.gcube.dataanalysis.geo.matrixmodel
 
PointsExtractor(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.PointsExtractor
 
PointsMapsCreator - Class in org.gcube.dataanalysis.geo.algorithms
 
PointsMapsCreator() - Constructor for class org.gcube.dataanalysis.geo.algorithms.PointsMapsCreator
 
pointToBoundingBox(double, double, double) - Static method in class org.gcube.dataanalysis.geo.meta.OGCFormatter
 
PolygonMapsCreator - Class in org.gcube.dataanalysis.geo.algorithms
 
PolygonMapsCreator() - Constructor for class org.gcube.dataanalysis.geo.algorithms.PolygonMapsCreator
 
PolyMapMetadata - Class in org.gcube.dataanalysis.geo.meta
 
PolyMapMetadata() - Constructor for class org.gcube.dataanalysis.geo.meta.PolyMapMetadata
 
postProcess(boolean, boolean) - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
prevbroadcastTimePeriod - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
prevmaxMessages - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
prevmaxNumberOfStages - Variable in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
print() - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
process() - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
process() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
process() - Method in class org.gcube.dataanalysis.geo.algorithms.RasterDataPublisher
 
process() - Method in class org.gcube.dataanalysis.geo.algorithms.ShapefilePublisher
 
process() - Method in class org.gcube.dataanalysis.geo.vti.EstimateFishingActivity
 
process() - Method in class org.gcube.dataanalysis.geo.vti.EstimateMonthlyFishingEffort
 
process() - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
propertiesMapToColumnString(Map<String, String>, boolean) - Static method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
propertiesMapToDatabaseString(Map<String, String>) - Static method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
publishOnThredds(String, String, String, String, String, String[], double, boolean) - Static method in class org.gcube.dataanalysis.geo.utils.ThreddsPublisher
 
publishTable(String, String, double, String, String, String, String, String, String, String, String, boolean) - Static method in class org.gcube.dataanalysis.geo.meta.PolyMapMetadata
 

R

RasterDataPublisher - Class in org.gcube.dataanalysis.geo.algorithms
 
RasterDataPublisher() - Constructor for class org.gcube.dataanalysis.geo.algorithms.RasterDataPublisher
 
RasterTable - Class in org.gcube.dataanalysis.geo.matrixmodel
transforms a raster map into a table
RasterTable(double, double, double, double, double, double, double, double[][], AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
RasterTable(double, double, double, double, double, double, double, double, double[][], AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
RasterTable(double, double, double, double, double, double, double, double[][], HashMap<Double, Map<String, String>>, AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
RasterTable(double, double, double, double, double, double, double, double, double[][], HashMap<Double, Map<String, String>>, AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
readAndDisplayMetadata(String) - Method in class org.gcube.dataanalysis.geo.utils.GeoTiffMetadata
 
readRaster(String) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterReader
The most useful method - reads a raster file, and returns a Raster object.
redandyellow - Variable in class density.WorldImageProducer
 
resolution - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
resolution - Static variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
resolutionValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
resolutionValue - Variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
resolveFile(String) - Method in class org.gcube.dataanalysis.geo.utils.transfer.VFileSystemManager
 
resolveFolder(String) - Method in class org.gcube.dataanalysis.geo.utils.transfer.VFileSystemManager
 
resourceManager - Variable in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
resourceManager - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
resourceManager - Variable in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
resourceManager - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
responseCRS - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
resx - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
resy - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
resz - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
retrieveDataFromAsc(List<Tuple<Double>>, int) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
retrieveDataFromNetCDF(String, String, int, List<Tuple<Double>>) - Method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
retrieveZScale() - Method in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
rows - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
rowToCode(Object[]) - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
rowToCode(Object[]) - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreator
 
rowToCode(Object[]) - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreatorQuadrant
 
rowToCoords(Object[]) - Method in class org.gcube.dataanalysis.geo.vti.CSquare2Coordinates
 
rowToCoords(Object[]) - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
run() - Method in class org.gcube.dataanalysis.geo.utils.transfer.CopyStreamHandler
 

S

sampleColor - Variable in class density.WorldImageProducer
 
sampleRadius - Variable in class density.WorldImageProducer
 
samples - Variable in class density.WorldImageProducer
 
samplesFilePath - Variable in class density.Maxent
 
samplingFrequency - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
samplingFrequencyValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
scale - Variable in class density.WorldImageProducer
 
selectInformationForTransformation(AlgorithmConfiguration, String, int, int) - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
selectInformationForTransformation(AlgorithmConfiguration, String, int, int) - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreator
 
selectInformationForTransformation(AlgorithmConfiguration, String, int, int) - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreatorQuadrant
 
selectInformationForTransformation(AlgorithmConfiguration, String, int, int) - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
setAbstractField(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setAbstractField(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setAuthor(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setAuthor(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setCategoryTypes(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setCellFormat(NumberFormat) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterWriter
Can be used to set a number format for the cells.
setCellsize(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setClassNames(String) - Method in class density.WorldImageProducer
 
setClassNames(String[]) - Method in class density.WorldImageProducer
 
setColorClasses(String) - Method in class density.WorldImageProducer
 
setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
setConnectiontimeout(int) - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
setContactInfo(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setContactInfo(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setCoordinates(List<Tuple<Double>>) - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
setCurrentLat(double) - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
setCurrentLong(double) - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
setCurrentResolution(double) - Method in class org.gcube.dataanalysis.geo.utils.CSquareCodesConverter
 
setCustomTopics(String...) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setCustomTopics(String...) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setData(double[][]) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Copies the given data into the underlying data array.
setData(int[][]) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Copies the given data into the underlying data array.
setdx(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setdy(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setEndDate(Date) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setEndDate(Date) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setGeonetworkGroup(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setGeonetworkPwd(String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
setGeonetworkPwd(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setGeonetworkPwd(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setGeonetworkUrl(String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
setGeonetworkUrl(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setGeonetworkUrl(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setGeonetworkUser(String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
setGeonetworkUser(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setGeonetworkUser(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setGeoserverUrl(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setGrid(Grid, int, int) - Method in class density.WorldImageProducer
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreator
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.FAOOceanAreaCreatorQuadrant
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.PointsMapsCreator
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.PolygonMapsCreator
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.RasterDataPublisher
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.ShapefilePublisher
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromCsquares
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromPoints
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.vti.CSquare2Coordinates
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.vti.EstimateFishingActivity
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.vti.EstimateMonthlyFishingEffort
 
setInputParameters() - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
setLayerName(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setLayerName(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setLayerUrl(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setMaxEffort(double) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.MonthlyFishingEffortCalculator
 
setMaxval(double) - Method in class density.WorldImageProducer
 
setMinEffort(double) - Method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.MonthlyFishingEffortCalculator
 
setMinval(double) - Method in class density.WorldImageProducer
 
setMode(int) - Method in class density.WorldImageProducer
 
setNDATA(String) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setNumCategoriesByMax - Static variable in class density.WorldImageProducer
 
setPolygon(Geometry) - Method in class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
setProcessdescription(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setProcessdescription(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setPurpose(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setPurpose(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setResolution(double) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setResolution(double) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setScope(String) - Method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 
setSize(int, int) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
Sets the size of the raster, and also initialises the array with NDATA
setSourceFileName(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setSourceGenerationDate(Date) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setSourceGenerationDate(Date) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setStartDate(Date) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setStartDate(Date) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setTablename(String) - Method in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
setTestSamples(Sample[]) - Method in class density.WorldImageProducer
 
setThreddsCatalogUrl(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setTime(int, int, String, String) - Method in class density.WorldImageProducer
 
setTimeout(FileSystemOptions, int) - Method in class org.gcube.dataanalysis.geo.utils.transfer.HttpFileSystemConfBuilderPatched
 
setTitle(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setTitle(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setTransferTimeout(int) - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
setup(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
setUsageField(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setUsageField(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setUsageLimitations(String) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setUsageLimitations(String) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setValue(int, int, double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setValue(Double) - Method in class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
setXLeftLow(double) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setXLeftLow(double) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setXll(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setXRightUpper(double) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setXRightUpper(double) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setYLeftLow(double) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setYLeftLow(double) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
setYll(double) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
setYRightUpper(double) - Method in class org.gcube.dataanalysis.geo.meta.GenericLayerMetadata
 
setYRightUpper(double) - Method in class org.gcube.dataanalysis.geo.meta.NetCDFMetadata
 
ShapefilePublisher - Class in org.gcube.dataanalysis.geo.algorithms
 
ShapefilePublisher() - Constructor for class org.gcube.dataanalysis.geo.algorithms.ShapefilePublisher
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.CSquaresCreator
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.ESRIGRIDExtraction
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparator
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsCreator
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.OccurrenceEnrichment
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.RasterDataPublisher
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.ShapefilePublisher
 
shutdown() - Method in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
shutdown() - Method in class org.gcube.dataanalysis.geo.vti.GridCWP2Coordinates
 
signal - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
signal - Variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
SpeciesDistributionsMapsCreatorFromCsquares - Class in org.gcube.dataanalysis.geo.algorithms
 
SpeciesDistributionsMapsCreatorFromCsquares() - Constructor for class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromCsquares
 
SpeciesDistributionsMapsCreatorFromPoints - Class in org.gcube.dataanalysis.geo.algorithms
 
SpeciesDistributionsMapsCreatorFromPoints() - Constructor for class org.gcube.dataanalysis.geo.algorithms.SpeciesDistributionsMapsCreatorFromPoints
 
speedClassification(int) - Static method in class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIClassificator
 
StaticGeoChartProducer - Class in org.gcube.dataanalysis.geo.algorithms
 
StaticGeoChartProducer() - Constructor for class org.gcube.dataanalysis.geo.algorithms.StaticGeoChartProducer
 
stop() - Method in class org.gcube.dataanalysis.geo.algorithms.MapsComparatorNode
 
SUPPORTED_CRS_CODES - Static variable in class org.gcube.dataanalysis.geo.utils.CrsHelper
 

T

Table - Class in org.gcube.dataanalysis.geo.connectors.table
 
Table(AlgorithmConfiguration, double) - Constructor for class org.gcube.dataanalysis.geo.connectors.table.Table
 
tableLabelValue - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
tableLabelValue - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
TableMatrixRepresentation - Class in org.gcube.dataanalysis.geo.connectors.table
 
TableMatrixRepresentation() - Constructor for class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
tableNameParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
tableNameValue - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
tableNameValue - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
takeFirstDouble(Array) - Static method in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
test1() - Static method in class ucar.nc2.dt.grid.GridCoordinate2D
 
test2() - Static method in class ucar.nc2.dt.grid.GridCoordinate2D
 
test3() - Static method in class ucar.nc2.dt.grid.GridCoordinate2D
 
testReaders() - Static method in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
testSampleColor - Variable in class density.WorldImageProducer
 
testsamples - Variable in class density.WorldImageProducer
 
ThreddsExplorer - Class in org.gcube.dataanalysis.geo.utils
Explores the contents of a Thredds instance Guesses the nature of a file hosted on the server
ThreddsExplorer() - Constructor for class org.gcube.dataanalysis.geo.utils.ThreddsExplorer
 
ThreddsFetcher - Class in org.gcube.dataanalysis.geo.insertion
 
ThreddsFetcher(String) - Constructor for class org.gcube.dataanalysis.geo.insertion.ThreddsFetcher
 
ThreddsMetadataBatchInserter - Class in org.gcube.dataanalysis.geo.batch
 
ThreddsMetadataBatchInserter() - Constructor for class org.gcube.dataanalysis.geo.batch.ThreddsMetadataBatchInserter
 
ThreddsPublisher - Class in org.gcube.dataanalysis.geo.utils
 
ThreddsPublisher() - Constructor for class org.gcube.dataanalysis.geo.utils.ThreddsPublisher
 
time - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
time - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
time - Variable in class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
time - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
timeDimensionColumnParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
TimeExtraction - Class in org.gcube.dataanalysis.geo.algorithms
 
TimeExtraction() - Constructor for class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
TimeExtractionTable - Class in org.gcube.dataanalysis.geo.algorithms
 
TimeExtractionTable() - Constructor for class org.gcube.dataanalysis.geo.algorithms.TimeExtractionTable
 
TimeGeoChartProducer - Class in org.gcube.dataanalysis.geo.algorithms
 
TimeGeoChartProducer() - Constructor for class org.gcube.dataanalysis.geo.algorithms.TimeGeoChartProducer
 
timeIndex - Variable in class density.WorldImageProducer
 
timeLabel - Variable in class density.WorldImageProducer
 
timeline - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
timePattern - Variable in class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
timePrefix - Static variable in class org.gcube.dataanalysis.geo.connectors.netcdf.NetCDFDataExplorer
 
timePrefix - Static variable in class org.gcube.dataanalysis.geo.utils.ThreddsExplorer
 
TimeSeriesExtractor - Class in org.gcube.dataanalysis.geo.matrixmodel
 
TimeSeriesExtractor(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.TimeSeriesExtractor
 
toESRI(String, String, double, String, String, String) - Static method in class org.gcube.dataanalysis.geo.utils.CSV2ESRIGRID
 
toggleSampleColor - Static variable in class density.WorldImageProducer
 
transfer(URI, String) - Method in class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
TransferUtil - Class in org.gcube.dataanalysis.geo.utils.transfer
 
TransferUtil() - Constructor for class org.gcube.dataanalysis.geo.utils.transfer.TransferUtil
 
treatTitleForGN(String) - Static method in class org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector
 

U

ucar.nc2.dt.grid - package ucar.nc2.dt.grid
 
update(Graphics) - Method in class density.WorldImageProducer
 
Utils - Class in org.gcube.dataanalysis.geo.utils.transfer
 
Utils() - Constructor for class org.gcube.dataanalysis.geo.utils.transfer.Utils
 

V

value - Variable in class org.gcube.dataanalysis.geo.connectors.wfs.FeaturedPolygon
 
valueDimensionColumnParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
valueOf(String) - Static method in enum org.gcube.dataanalysis.geo.utils.GeospatialDataPublicationLevel
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.gcube.dataanalysis.geo.utils.GeospatialDataPublicationLevel
Returns an array containing the constants of this enum type, in the order they are declared.
valuesColumn - Static variable in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
valuesPropertiesMap - Variable in class org.gcube.dataanalysis.geo.matrixmodel.RasterTable
 
VectorOperations - Class in org.gcube.dataanalysis.geo.utils
 
VectorOperations() - Constructor for class org.gcube.dataanalysis.geo.utils.VectorOperations
 
vectorToMatix(List<Double>, double, double, double, double, double, double) - Static method in class org.gcube.dataanalysis.geo.utils.VectorOperations
 
VFileSystemManager - Class in org.gcube.dataanalysis.geo.utils.transfer
 
VFileSystemManager(String) - Constructor for class org.gcube.dataanalysis.geo.utils.transfer.VFileSystemManager
 
visible - Variable in class density.WorldImageProducer
 
VTIBathymetry - Class in org.gcube.dataanalysis.geo.vti.vesselsprocessing
Class for obtaining altimetry and bathymetry values from a netCDF file.
VTIBathymetry(String) - Constructor for class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIBathymetry
Creates an instance of VTIBathymetry with the specified file.
VTIClassificator - Class in org.gcube.dataanalysis.geo.vti.vesselsprocessing
 
VTIClassificator() - Constructor for class org.gcube.dataanalysis.geo.vti.vesselsprocessing.VTIClassificator
 

W

WCS - Class in org.gcube.dataanalysis.geo.connectors.wcs
 
WCS(AlgorithmConfiguration, String) - Constructor for class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
WCSMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
WCSMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.WCSMetadataInsertDev
 
weight - Variable in class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
WFS - Class in org.gcube.dataanalysis.geo.connectors.wfs
 
WFS() - Constructor for class org.gcube.dataanalysis.geo.connectors.wfs.WFS
 
WFS2Coordinates(String) - Static method in class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
WFSDataExplorer - Class in org.gcube.dataanalysis.geo.connectors.wfs
 
WFSDataExplorer() - Constructor for class org.gcube.dataanalysis.geo.connectors.wfs.WFSDataExplorer
 
white - Variable in class density.WorldImageProducer
 
width - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
WorldClimLZWMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
WorldClimLZWMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.WorldClimLZWMetadataInsertDev
 
WorldClimNoCompressionMetadataInsertDev - Class in org.gcube.dataanalysis.geo.batch
 
WorldClimNoCompressionMetadataInsertDev() - Constructor for class org.gcube.dataanalysis.geo.batch.WorldClimNoCompressionMetadataInsertDev
 
WorldImageProducer - Class in density
 
WorldImageProducer(Grid, int, int) - Constructor for class density.WorldImageProducer
 
WorldImageProducer(Grid) - Constructor for class density.WorldImageProducer
 
writeImage(String) - Method in class density.WorldImageProducer
 
writeImage(String, int) - Method in class density.WorldImageProducer
 
writeRaster(String, AscRaster) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterWriter
Writes out the given Raster object to the given filename.
writeRaster(String, double[][], double, double, double, String) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterWriter
Shortcut method, if you just have some data and want to write it out as a Raster.
writeRasterInvertYAxis(String, AscRaster) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterWriter
 
writeRasterInvertYAxis(String, double[][], double, double, double, String) - Method in class org.gcube.dataanalysis.geo.connectors.asc.AscRasterWriter
 

X

x - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
x - Static variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
x - Variable in class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
xDimensionColumnParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
xline - Static variable in class density.WorldImageProducer
 
xll - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
xOffset - Variable in class density.WorldImageProducer
 
xOrigin - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
xResValue - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
xResValue - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
xScale - Variable in class org.gcube.dataanalysis.geo.utils.GeoTiffMetadata
 
xValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
xValue - Variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
XYExtraction - Class in org.gcube.dataanalysis.geo.algorithms
 
XYExtraction() - Constructor for class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
XYExtractionTable - Class in org.gcube.dataanalysis.geo.algorithms
 
XYExtractionTable() - Constructor for class org.gcube.dataanalysis.geo.algorithms.XYExtractionTable
 
XYExtractor - Class in org.gcube.dataanalysis.geo.matrixmodel
 
XYExtractor(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.XYExtractor
 

Y

y - Static variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
y - Static variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
y - Variable in class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
yDimensionColumnParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
yline - Static variable in class density.WorldImageProducer
 
yll - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscRaster
 
yOffset - Variable in class density.WorldImageProducer
 
yOrigin - Variable in class org.gcube.dataanalysis.geo.connectors.asc.AscDataExplorer
 
yResValue - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
yResValue - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
yScale - Variable in class org.gcube.dataanalysis.geo.utils.GeoTiffMetadata
 
yValue - Variable in class org.gcube.dataanalysis.geo.algorithms.TimeExtraction
 
yValue - Variable in class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 

Z

z - Variable in class org.gcube.dataanalysis.geo.charts.GeoTemporalPoint
 
zDimensionColumnParameter - Static variable in class org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation
 
ZExtraction - Class in org.gcube.dataanalysis.geo.algorithms
 
ZExtraction() - Constructor for class org.gcube.dataanalysis.geo.algorithms.ZExtraction
 
ZExtractionTable - Class in org.gcube.dataanalysis.geo.algorithms
 
ZExtractionTable() - Constructor for class org.gcube.dataanalysis.geo.algorithms.ZExtractionTable
 
ZExtractor - Class in org.gcube.dataanalysis.geo.matrixmodel
 
ZExtractor(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.geo.matrixmodel.ZExtractor
 
zmax - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
zmax - Variable in class org.gcube.dataanalysis.geo.matrixmodel.ZExtractor
 
zmin - Variable in class org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor
 
zmin - Variable in class org.gcube.dataanalysis.geo.matrixmodel.ZExtractor
 
zScale - Variable in class org.gcube.dataanalysis.geo.connectors.geotiff.GeoTiff
 
zScale - Variable in class org.gcube.dataanalysis.geo.connectors.wcs.WCS
 
zScale - Variable in class org.gcube.dataanalysis.geo.utils.GeoTiffMetadata
 
zValue - Variable in class org.gcube.dataanalysis.geo.algorithms.MaxEnt4NicheModellingTransducer
 
zValue - Variable in class org.gcube.dataanalysis.geo.algorithms.XYExtraction
 
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