KnitrCompiler (ecological-engine-smart-executor 1.6.8-SNAPSHOT API)

java.lang.Object
- org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm
- - org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalInfraAlgorithm
  - - org.gcube.dataanalysis.executor.rscripts.generic.GenericRScript
    - - org.gcube.dataanalysis.executor.rscripts.KnitrCompiler

All Implemented Interfaces:

org.gcube.dataanalysis.ecoengine.interfaces.AlgorithmDescriptor, org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent, org.gcube.dataanalysis.ecoengine.interfaces.Transducerer
```
public class KnitrCompiler
extends GenericRScript
```

Field Summary
- Fields inherited from class org.gcube.dataanalysis.executor.rscripts.generic.GenericRScript
  currentFolder, environmentalvariables, inputvariables, mainScriptName, output, outputValues, outputvariables, packageURL
- Fields inherited from class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm
  config, inputs, outputParameters, resourceManager, status

Constructor Summary

Constructors
Constructor Description

KnitrCompiler()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`String`	`getDescription()`
`org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType`	`getOutput()`
`protected void`	`initVariables()`
`protected void`	`setInputParameters()`

Methods inherited from class org.gcube.dataanalysis.executor.rscripts.generic.GenericRScript
analyseContent, generateRemoteLogFile, getStatus, init, process, saveLogFile, shutdown

Methods inherited from class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalInfraAlgorithm
sendNotification

Methods inherited from class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm
addBooleanInput, addDoubleInput, addEnumerateInput, addFileInput, addIntegerInput, addOutputString, addRemoteDatabaseInput, addStringInput, compute, getInfrastructure, getInputParameter, getInputParameters, getResourceLoad, getResources, log, setConfiguration

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - KnitrCompiler
```
public KnitrCompiler()
```
- Method Detail
  - getDescription
```
public String getDescription()
```
    Specified by:
    
    getDescription in interface org.gcube.dataanalysis.ecoengine.interfaces.AlgorithmDescriptor
    
    Specified by:
    
    getDescription in class org.gcube.dataanalysis.ecoengine.interfaces.StandardLocalExternalAlgorithm
  - initVariables
```
protected void initVariables()
```
    Overrides:
    
    initVariables in class GenericRScript
  - setInputParameters
```
protected void setInputParameters()
```
    Overrides:
    
    setInputParameters in class GenericRScript
  - getOutput
```
public org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType getOutput()
```
    Specified by:
    
    getOutput in interface org.gcube.dataanalysis.ecoengine.interfaces.AlgorithmDescriptor
    
    Overrides:
    
    getOutput in class GenericRScript